HHsearch alignment for GI: 254781162 and conserved domain: COG0456
>COG0456 RimI Acetyltransferases [General function prediction only].
Probab=99.21 E-value=9.1e-11 Score=82.90 Aligned_cols=143 Identities=20% Similarity=0.317 Sum_probs=89.6
Q ss_pred HHHCCEEEEEECCHHHHH-----HHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEC---C----EEEEEEEEEEEEE
Q ss_conf 320120344207989999-----999985389872100131103888876078999988---9----8999999877611
Q gi|254781162|r 28 QKIGAFFLERLEHDSSIC-----AMHADSFGPGRFVRAAVLLREQGMHDLSLSFLCAEG---K----RIVGSVRMTPISI 95 (192)
Q Consensus 28 ~~~~~~~~~R~e~~~di~-----ai~~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~---~----~IVG~i~~~pv~~ 95 (192)
T Consensus 6 ~~~~~~~~ir~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~ 84 (177)
T COG0456 6 ELSEDKVTIREAINKDLLDVALAALEARTFDIR-LPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDG 84 (177)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECC
T ss_conf 667555653314076656789988877515767-6430999999860487369999626666654310458999974047
Q ss_pred CC---CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC-CEEEEEE------CHHHHHHCCCEECCCCCEECCCCC
Q ss_conf 88---2238997678851113899589999999999961388-4799840------865787429487463653668999
Q gi|254781162|r 96 EK---ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGS-QVIVLVG------DIAYYSKLGFQAVPWKSLILPAPV 165 (192)
Q Consensus 96 ~~---~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~-~~v~l~g------~~~yY~rfGF~~~~~~~l~~p~pv 165 (192)
T Consensus 85 ~~~~~~~~~-i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~~~yy~~~~ 163 (177)
T COG0456 85 RPSADHEGH-IYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEVVKIRKNYYADGN 163 (177)
T ss_pred CCCCCCCEE-EEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCEEEHHHHHHHHCCC
T ss_conf 656676089-9999999787699899999999999998527673699999478699999999869943121375402455
Q ss_pred CHHHEEE
Q ss_conf 9566698
Q gi|254781162|r 166 DPNRVLF 172 (192)
Q Consensus 166 ~~~~~l~ 172 (192)
T Consensus 164 ~~a~~~~ 170 (177)
T COG0456 164 GDALLML 170 (177)
T ss_pred CCHHHHH
T ss_conf 6499998