HHsearch alignment for GI: 254781162 and conserved domain: KOG3139

Probab=99.40  E-value=5.6e-12  Score=90.01  Aligned_cols=111  Identities=20%  Similarity=0.293  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCE-EEEEEEEE-EEEECCCCEEEEEEEEECCCCCCCCHHH
Q ss_conf             999999998538987210013110388887607899998898-99999987-7611882238997678851113899589
Q gi|254781162|r   42 SSICAMHADSFGPGRFVRAAVLLREQGMHDLSLSFLCAEGKR-IVGSVRMT-PISIEKITGHLLGPIVVHPLYQNKGIGR  119 (192)
Q Consensus        42 ~di~ai~~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~~~-IVG~i~~~-pv~~~~~~~~~LgplaV~P~~rg~GiG~  119 (192)
T Consensus        28 ~~im~Li~k~l---sepyS~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~~r~-~~rgyi~mLaV~~e~Rg~GIg~  103 (165)
T KOG3139          28 ADIMRLIDKDL---SEPYSIYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDTHRN-TLRGYIAMLAVDSEYRGQGIGK  103 (165)
T ss_pred             HHHHHHHHHHC---CCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCCC-CCEEEEEEEEECHHHCCCCHHH
T ss_conf             88998874014---8566777877502578668999990788668899983445577-6448999999612533456899


Q ss_pred             HHHHHHHHHHHHCCCCEEEEEEC------HHHHHHCCCEECCC
Q ss_conf             99999999996138847998408------65787429487463
Q gi|254781162|r  120 KLISMSVDAAEKKGSQVIVLVGD------IAYYSKLGFQAVPW  156 (192)
Q Consensus       120 ~Li~~~l~~a~~~g~~~v~l~g~------~~yY~rfGF~~~~~  156 (192)
T Consensus       104 aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r  146 (165)
T KOG3139         104 ALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYESLGFKRDKR  146 (165)
T ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEECC
T ss_conf             9999999999977996899832433418999988549467331