HHsearch alignment for GI: 254781162 and conserved domain: TIGR03243
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=96.25 E-value=0.029 Score=33.17 Aligned_cols=150 Identities=19% Similarity=0.271 Sum_probs=82.6
Q ss_pred EEEECCHHHHHHHHHHHC--CCCCC---------------CCEEEEEECCCCCCCCEEEEEEE--CCEEEEEEEEEEE--
Q ss_conf 442079899999999853--89872---------------10013110388887607899998--8989999998776--
Q gi|254781162|r 35 LERLEHDSSICAMHADSF--GPGRF---------------VRAAVLLREQGMHDLSLSFLCAE--GKRIVGSVRMTPI-- 93 (192)
Q Consensus 35 ~~R~e~~~di~ai~~~~f--gpgr~---------------~~~~~~lR~~~~~~~~lslVA~~--~~~IVG~i~~~pv-- 93 (192)
T Consensus 1 viRpv~~~Dl~~l~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sf~~-~~~~~~~~YlFVLED~~tg~vvG~s~I~a~vG 79 (335)
T TIGR03243 1 IVRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAG-ESTRGEEGYLFVLEDTETGTVAGVSAIEAAVG 79 (335)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCCEEEEEEEECCCCCEEEEEEEEECCC
T ss_conf 94437323099999999973998655999999999999999998648-77888734899998778991899874676145
Q ss_pred --------EEC----------------------C-CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHH---HHCCCCEEEE
Q ss_conf --------118----------------------8-22389976788511138995899999999999---6138847998
Q gi|254781162|r 94 --------SIE----------------------K-ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAA---EKKGSQVIVL 139 (192)
Q Consensus 94 --------~~~----------------------~-~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a---~~~g~~~v~l 139 (192)
T Consensus 80 ~~~Pfy~yr~~~~~h~S~~L~~~~~~~~L~l~~d~tg~sEl~tLfl~p~~R~~~~G~lLS~~RflFma~~~~rF~~~viA 159 (335)
T TIGR03243 80 LDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRFLFIAAFRERFGDKIIA 159 (335)
T ss_pred CCCCCEEEEECCEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88874799917556506346872121169976278787057999987787378724589999999998737664367885
Q ss_pred --------EECHHHHHHCCCE-------ECCC------CCEECCCCCCHHHEEEEECCCCCCCCCEEEE
Q ss_conf --------4086578742948-------7463------6536689999566698435778101781677
Q gi|254781162|r 140 --------VGDIAYYSKLGFQ-------AVPW------KSLILPAPVDPNRVLFLPLVQNVAQNIKGIV 187 (192)
Q Consensus 140 --------~g~~~yY~rfGF~-------~~~~------~~l~~p~pv~~~~~l~l~L~~~~l~~~~G~v 187 (192)
T Consensus 160 EmRG~~d~~G~SPFW~~lg~~Ff~mdF~~AD~ls~~~~k~FIae--LmP~~PIYv~lLp~~Aq~vIG~v 226 (335)
T TIGR03243 160 EMRGVSDEQGRSPFWEALGRHFFSMDFAQADYLSGIGSKTFIAE--LMPKYPIYVPLLPEEAQDVIGQV 226 (335)
T ss_pred HCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCHHHHH--HCCCCCEEEECCCHHHHHHHCCC
T ss_conf 41787389999830787634235998778778872687244887--68899754205998999972984