HHsearch alignment for GI: 254781162 and conserved domain: pfam02474

>pfam02474 NodA Nodulation protein A (NodA). Rhizobia nodulation (nod) genes control the biosynthesis of Nod factors required for infection and nodulation of their legume hosts. Nodulation protein A (NodA) is a N-acetyltransferase involved in production of Nod factors that stimulate mitosis in various plant protoplasts.

Probab=96.43  E-value=0.011  Score=35.54  Aligned_cols=113  Identities=14%  Similarity=0.175  Sum_probs=78.9

Q ss_pred             ECCHHHHHHHHHHHCCC-CCC-CCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEE--EEECCCCE--EEEEEEEECCC
Q ss_conf             07989999999985389-872-10013110388887607899998898999999877--61188223--89976788511
Q gi|254781162|r   38 LEHDSSICAMHADSFGP-GRF-VRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTP--ISIEKITG--HLLGPIVVHPL  111 (192)
Q Consensus        38 ~e~~~di~ai~~~~fgp-gr~-~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~p--v~~~~~~~--~~LgplaV~P~  111 (192)
T Consensus        17 l~dH~eLaeFfrktYgptgafnakpFeG~RSWAGARPElR~IgyD~~GVaAH~G~LRRFIkVg~vDlLVaELGLygVRpD   96 (196)
T pfam02474        17 LADHIELSEFFRKTYGPTGAFNAKPFEGGRSWAGARPELRAIAYDSRGVAAHMGLLRRFIKVGEVDLLVAELGLYGVRPD   96 (196)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHEECCEEEEEEEEEEEEECCC
T ss_conf             11169999999984288764346656777564557851378876573088988888775124761013443001476565


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECH---HHHHHCCC
Q ss_conf             13899589999999999961388479984086---57874294
Q gi|254781162|r  112 YQNKGIGRKLISMSVDAAEKKGSQVIVLVGDI---AYYSKLGF  151 (192)
Q Consensus       112 ~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~---~yY~rfGF  151 (192)
T Consensus        97 lEGlGi~~s-~~~m~PvLq~LgVPF~FGtVR~al~~Hv~R~~r  138 (196)
T pfam02474        97 LEGLGISHS-MRVMYPVLQELGVPFAFGTVRHALRKHVERLCR  138 (196)
T ss_pred             CCCCCHHHH-HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHC
T ss_conf             133534677-989988888629974523525989999999821