HHsearch results for GI: 254781162 and protein with PDBid: 1vkc_A
>1vkc_A Putative acetyl transferase; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1
Probab=99.42 E-value=2.3e-12 Score=91.01 Aligned_cols=85 Identities=20% Similarity=0.293 Sum_probs=68.5
Q ss_pred CCCEEEEEEE-CCEEEEEEEEEEEEE--CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-----
Q ss_conf 7607899998-898999999877611--88223899767885111389958999999999996138847998408-----
Q gi|254781162|r 71 DLSLSFLCAE-GKRIVGSVRMTPISI--EKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD----- 142 (192)
Q Consensus 71 ~~~lslVA~~-~~~IVG~i~~~pv~~--~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~----- 142 (192)
.....||+++ ++++||++.+++... ...+...+..++|+|+|||+|+|++||+.+++.|+++|+..+.|...
T Consensus 59 ~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~~~i~~l~V~p~~RgkGiG~~Ll~~~~~~a~~~G~~~i~L~v~~~N~A 138 (158)
T 1vkc_A 59 GEHKFFVALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPA 138 (158)
T ss_dssp SEEEEEEEEETTCCEEEEEEEEEEECTTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTH
T ss_pred CCCEEEEEEECCCEEEEEEEEEEECCCCCCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
T ss_conf 99479999973997999999997047778865899999999888919996999999999999986998899998899789
Q ss_pred HHHHHHCCCEECC
Q ss_conf 6578742948746
Q gi|254781162|r 143 IAYYSKLGFQAVP 155 (192)
Q Consensus 143 ~~yY~rfGF~~~~ 155 (192)
..||+|+||++..
T Consensus 139 ~~~Y~k~GF~~~~ 151 (158)
T 1vkc_A 139 VKWYEERGYKARA 151 (158)
T ss_dssp HHHHHHTTCCCCC
T ss_pred HHHHHHCCCEEEE
T ss_conf 9999988998998