HHsearch results for GI: 254781162 and protein with PDBid: 2cnt_A
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal protein, acetyltransferase; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*
Probab=99.60 E-value=6e-15 Score=106.10 Aligned_cols=137 Identities=18% Similarity=0.222 Sum_probs=97.8
Q ss_pred EEEEECCHHHHHHH---HHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECC
Q ss_conf 34420798999999---998538987210013110388887607899998898999999877611882238997678851
Q gi|254781162|r 34 FLERLEHDSSICAM---HADSFGPGRFVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHP 110 (192)
Q Consensus 34 ~~~R~e~~~di~ai---~~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P 110 (192)
+.||.-+++|+.++ +..+|.-. .++..+..... ...+++|++.+|+|||++.+++.. .. ..+..++|+|
T Consensus 2 ~~Ir~lt~~Dl~~v~~Ie~~af~~p-ws~~~~~~~~~---~~~~~~v~~~~~~ivG~~~~~~~~---~~-~~I~~l~V~p 73 (160)
T 2cnt_A 2 NTISILSTTDLPAAWQIEQRAHAFP-WSEKTFFGNQG---ERYLNLKLTADDRMAAFAITQVVL---DE-ATLFNIAVDP 73 (160)
T ss_dssp EEEEECCGGGHHHHHHHHHHHCSSC-CCHHHHHHSCS---TTBCCEEEEETTEEEEEEEEEEET---TE-EEEEEEEECG
T ss_pred CEEEECCHHHHHHHHHHHHHHCCCC-CCHHHHHHHHH---CCCEEEEEEECCEEEEEEEEEECC---CE-EEEEEEEEEH
T ss_conf 6823699999999999999865899-98999998744---893899999999899999999809---96-9999999936
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC------HHHHHHCCCEECCCCCE--ECCCCCCHHHEEEEECCCC
Q ss_conf 11389958999999999996138847998408------65787429487463653--6689999566698435778
Q gi|254781162|r 111 LYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD------IAYYSKLGFQAVPWKSL--ILPAPVDPNRVLFLPLVQN 178 (192)
Q Consensus 111 ~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~------~~yY~rfGF~~~~~~~l--~~p~pv~~~~~l~l~L~~~ 178 (192)
+|||+|+|++||+.+++.++++|+..+.+... ..||+|+||+.+....- ...+...+..+|.++|+--
T Consensus 74 ~~rg~Gig~~Ll~~~~~~~~~~~~~~i~l~v~~~N~~a~~fY~k~GF~~~g~~~~yy~~~~~~~D~~~m~~~l~~~ 149 (160)
T 2cnt_A 74 DFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYPTAQGHEDAIIMALPISMK 149 (160)
T ss_dssp GGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEECCCC
T ss_pred HHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCEECCCCCEEEEEEEEEEECC
T ss_conf 8743885689999999999963984899998748499999999889999849938374899988999999484512