HHsearch results for GI: 254781162 and protein with PDBid: 3frm_A

>3frm_A Uncharacterized conserved protein; APC61048, structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis atcc 12228}
Probab=99.38  E-value=4.6e-12  Score=89.24  Aligned_cols=122  Identities=15%  Similarity=0.096  Sum_probs=84.9

Q ss_pred             HCCEEEEEECCHHHHHHHHHHHCC---C-CC-CC-CEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEE
Q ss_conf             012034420798999999998538---9-87-21-001311038888760789999889899999987761188223899
Q gi|254781162|r   30 IGAFFLERLEHDSSICAMHADSFG---P-GR-FV-RAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLL  103 (192)
Q Consensus        30 ~~~~~~~R~e~~~di~ai~~~~fg---p-gr-~~-~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~L  103 (192)
                      ...++.+|+-++.+++...+....   | |. ++ ......|..........|||..++++||++.+...   + ....+
T Consensus       115 ~~~~v~Ir~v~~~~~~d~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~---~-~~~~i  190 (254)
T 3frm_A          115 RKRDVDIQLVSSNNINDYLHVYDAFARPFGDSYANMVKQHIYSSYNLDDIERLVAYVNHQPVGIVDIIMT---D-KTIEI  190 (254)
T ss_dssp             CCCSCEEEECCTTTHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHTTTSSCEEEEEEETTEEEEEEEEEEC---S-SCEEE
T ss_pred             CCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEEE---C-CEEEE
T ss_conf             8998089999888899999999864202584489999999999861689559999999989999999998---9-99999


Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC---HHHHHHCCCEECCC
Q ss_conf             767885111389958999999999996138847998408---65787429487463
Q gi|254781162|r  104 GPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD---IAYYSKLGFQAVPW  156 (192)
Q Consensus       104 gplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~---~~yY~rfGF~~~~~  156 (192)
                      ..++|+|+|||+|||++|++.+++.|++++... ++.++   ..+|.|+||+.+..
T Consensus       191 ~~i~v~~~~RgkGiG~~Ll~~~~~~a~~~~~~~-v~~~n~~A~~lY~k~GF~~~g~  245 (254)
T 3frm_A          191 DGFGVLEEFQHQGIGSEIQAYVGRMANERPVIL-VADGKDTAKDMYLRQGYVYQGF  245 (254)
T ss_dssp             EEEEECGGGTTSSHHHHHHHHHHHHHTTCCEEE-EECSSCTTHHHHHHTTCEEEEE
T ss_pred             EEEEECHHHCCCCHHHHHHHHHHHHHHHCCEEE-EECCCHHHHHHHHHCCCEEEEE
T ss_conf             999999898478899999999999972098899-9879889999999889989959