HHsearch alignment for GI: 254781165 and conserved domain: COG5135
>COG5135 Uncharacterized conserved protein [Function unknown].
Probab=99.68 E-value=4.4e-17 Score=119.06 Aligned_cols=178 Identities=20% Similarity=0.229 Sum_probs=122.4
Q ss_pred HHHHHCC--CCCCCEEEEEEECCC-CCEEEEEEEHHEEE-C----CEEEEEECCCCCCHHHHHCCC-----------CEE
Q ss_conf 9999858--889557999858599-87732210130000-3----305899517852012231189-----------479
Q gi|254781165|r 21 QEAQSSE--SHDPHAVVLATADRM-GFPNARVVLIKHFD-Q----EGFVFYTNSQSPKGKEILENP-----------KAS 81 (201)
Q Consensus 21 ~~A~~~~--~~~p~a~~LaTvd~~-g~p~~R~V~lr~~~-~----~g~~f~Tn~~S~K~~~l~~np-----------~~a 81 (201)
T Consensus 11 ~~~lk~N~dv~~~~yfQlATv~~~~~~PrnRTVvfRgFl~~D~~tn~L~F~TD~rS~Ki~ei~~qp~~~~~s~~~~~~fE 90 (245)
T COG5135 11 IQSLKNNTDVEPFVYFQLATVDELTNKPRNRTVVFRGFLFHDKRTNVLTFNTDMRSSKITEIFIQPNSNNSSDSKTPFFE 90 (245)
T ss_pred HHHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHH
T ss_conf 99975377646622589876225578876435998502404542205888400013355687636566788887750898
Q ss_pred EEEECCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEC--CCCCCCCCHHHH-HHHH-----HHHHHHCCC---
Q ss_conf 99736664089999987521763788897523883335026621--776567877778-8888-----888875057---
Q gi|254781165|r 82 LCFHWKSLARQLRVRGLVEKYCDLASDHYYASRPRESKIGAWAS--KQSQKMPSLDDL-QKSV-----QRYSSFYQE--- 150 (201)
Q Consensus 82 l~f~w~~~~rQiRi~G~~~~l~~~~~d~yf~~Rp~~sqi~a~~s--~QS~~i~s~~~l-~~~~-----~~~~~~~~~--- 150 (201)
T Consensus 91 aC~yfP~T~eQ~RisGQ~~l~s~~~~~~~~~Pa--~~~t~d~l~~~~~r~p~~w~~~~~~r~i~~~~~~Ed~a~f~ppP~ 168 (245)
T COG5135 91 ACFYFPETWEQYRISGQCFLISKQFKYDIFSPA--FSETNDDLTDEEIRTPINWDDDDDKRNIENDEHHEDEADFYPPPQ 168 (245)
T ss_pred HHHCCCCHHHHEEEEEEEEEECHHHCCCCCCCH--HHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHCCCCCC
T ss_conf 871250016255750069997332347544801--344555420000368666898100013222247431111279998
Q ss_pred -----CC---CCCC-------------------CCCEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCC
Q ss_conf -----88---7797-------------------973279997007996137898640269998815899707996289
Q gi|254781165|r 151 -----KE---IPRP-------------------VWWHGFRICPLSIEFWSERPYRLHDRLLFSRETIAGKWTQFLLYP 201 (201)
Q Consensus 151 -----~~---ip~P-------------------~~w~g~~i~P~~iEFw~~~~~rlHdR~~y~~~~~~~~W~~~~L~P 201 (201)
T Consensus 169 ~s~~q~~~~~~P~P~~~~~~e~~~~l~~~~~~~~~F~lv~le~~~VdfLnL~-g~pg~R~l~~rd~n~~~W~~q~Vnp 245 (245)
T COG5135 169 LSRHQKSLYRKPAPGQKLTSETSKQLDKLHAGLENFGLVCLEVDSVDFLNLK-GRPGERWLFQRDDNKDLWEEQEVNP 245 (245)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCEEEEEEC-CCCCCEEEEECCCCCCHHHCCCCCC
T ss_conf 7722365101678852235557025777775320325999603732136403-8987414676467713110014689