HHsearch alignment for GI: 254781165 and conserved domain: TIGR00558

>TIGR00558 pdxH pyridoxamine 5'-phosphate oxidase; InterPro: IPR000659 Pyridoxamine 5'-phosphate oxidase () is a FMN flavoprotein involved in the de novo synthesis of pyridoxine (vitamin B6) and pyridoxal phosphate. It oxidizes pyridoxamine-5-P (PMP) and pyridoxine-5-P (PNP) to pyridoxal-5-P. The sequences of the enzyme from bacterial (genes pdxH or fprA) and fungal (gene PDX3) sources show that this protein has been highly conserved throughout evolution. PdxH is evolutionary related to one of the enzymes in the phenazine biosynthesis protein pathway, phzD (also known as phzG). ; GO: 0004733 pyridoxamine-phosphate oxidase activity, 0008615 pyridoxine biosynthetic process.
Probab=100.00  E-value=0  Score=521.77  Aligned_cols=193  Identities=45%  Similarity=0.836  Sum_probs=188.3

Q ss_pred             CCCHHHHHHHHHHHHHH---CCCCCCCEEEEEEECC-CCCEEEEEEEHHEEECCEEEEEECCC-CCCHHHHHCCCCEEEE
Q ss_conf             76979999999999998---5888955799985859-98773221013000033058995178-5201223118947999
Q gi|254781165|r    9 NDVVFTLLSQWMQEAQS---SESHDPHAVVLATADR-MGFPNARVVLIKHFDQEGFVFYTNSQ-SPKGKEILENPKASLC   83 (201)
Q Consensus         9 ~~~P~~lf~~W~~~A~~---~~~~~p~a~~LaTvd~-~g~p~~R~V~lr~~~~~g~~f~Tn~~-S~K~~~l~~np~~al~   83 (201)
T Consensus        31 t~~P~~lF~~W~~~A~~~sda~~~eP~Am~~sTv~~P~GrP~sRmVLLK~~de~GFvFYTNy~tSRKg~qie~NP~aal~  110 (231)
T TIGR00558        31 TDDPIELFEIWLKEAIEDSDAKLEEPNAMTLSTVDEPEGRPSSRMVLLKELDERGFVFYTNYGTSRKGHQIEENPNAALV  110 (231)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHCCCEEEE
T ss_conf             66817799999999874147885787537886130677852000555304289844688644112102347548844887


Q ss_pred             EECCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHH--HHHHHHHCCCCC-CCCCCCCE
Q ss_conf             736664089999987521763788897523883335026621776567877778888--888887505788-77979732
Q gi|254781165|r   84 FHWKSLARQLRVRGLVEKYCDLASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKS--VQRYSSFYQEKE-IPRPVWWH  160 (201)
Q Consensus        84 f~w~~~~rQiRi~G~~~~l~~~~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~--~~~~~~~~~~~~-ip~P~~w~  160 (201)
T Consensus       111 F~W~~LeRQVRVeG~~Ek~~~~~s~~YF~sRPr~S~IGAWaS~QS~vi~~R~~Le~kkv~~~~~~~~~~~~~iP~P~~WG  190 (231)
T TIGR00558       111 FFWPKLERQVRVEGKVEKIPAEESDKYFKSRPRGSRIGAWASEQSKVISDREELESKKVALKLEEKFEDAEDIPRPDYWG  190 (231)
T ss_pred             EECHHHCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             20320287078610687648789988760598765022200122231230554477899999997322777887538888


Q ss_pred             EEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCC
Q ss_conf             79997007996137898640269998815899707996289
Q gi|254781165|r  161 GFRICPLSIEFWSERPYRLHDRLLFSRETIAGKWTQFLLYP  201 (201)
Q Consensus       161 g~~i~P~~iEFw~~~~~rlHdR~~y~~~~~~~~W~~~~L~P  201 (201)
T Consensus       191 G~rv~P~~iEFWQGrpsRLHDR~~y~rkte~D~W~~~RLaP  231 (231)
T TIGR00558       191 GYRVVPEEIEFWQGRPSRLHDRIVYRRKTENDAWKRKRLAP  231 (231)
T ss_pred             CEEEECCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECCC
T ss_conf             65840453753008698401122221025688614544589