HHsearch alignment for GI: 254781165 and conserved domain: TIGR00558
>TIGR00558 pdxH pyridoxamine 5'-phosphate oxidase; InterPro: IPR000659 Pyridoxamine 5'-phosphate oxidase () is a FMN flavoprotein involved in the de novo synthesis of pyridoxine (vitamin B6) and pyridoxal phosphate. It oxidizes pyridoxamine-5-P (PMP) and pyridoxine-5-P (PNP) to pyridoxal-5-P. The sequences of the enzyme from bacterial (genes pdxH or fprA) and fungal (gene PDX3) sources show that this protein has been highly conserved throughout evolution. PdxH is evolutionary related to one of the enzymes in the phenazine biosynthesis protein pathway, phzD (also known as phzG). ; GO: 0004733 pyridoxamine-phosphate oxidase activity, 0008615 pyridoxine biosynthetic process.
Probab=100.00 E-value=0 Score=521.77 Aligned_cols=193 Identities=45% Similarity=0.836 Sum_probs=188.3
Q ss_pred CCCHHHHHHHHHHHHHH---CCCCCCCEEEEEEECC-CCCEEEEEEEHHEEECCEEEEEECCC-CCCHHHHHCCCCEEEE
Q ss_conf 76979999999999998---5888955799985859-98773221013000033058995178-5201223118947999
Q gi|254781165|r 9 NDVVFTLLSQWMQEAQS---SESHDPHAVVLATADR-MGFPNARVVLIKHFDQEGFVFYTNSQ-SPKGKEILENPKASLC 83 (201)
Q Consensus 9 ~~~P~~lf~~W~~~A~~---~~~~~p~a~~LaTvd~-~g~p~~R~V~lr~~~~~g~~f~Tn~~-S~K~~~l~~np~~al~ 83 (201)
T Consensus 31 t~~P~~lF~~W~~~A~~~sda~~~eP~Am~~sTv~~P~GrP~sRmVLLK~~de~GFvFYTNy~tSRKg~qie~NP~aal~ 110 (231)
T TIGR00558 31 TDDPIELFEIWLKEAIEDSDAKLEEPNAMTLSTVDEPEGRPSSRMVLLKELDERGFVFYTNYGTSRKGHQIEENPNAALV 110 (231)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHCCCEEEE
T ss_conf 66817799999999874147885787537886130677852000555304289844688644112102347548844887
Q ss_pred EECCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHH--HHHHHHHCCCCC-CCCCCCCE
Q ss_conf 736664089999987521763788897523883335026621776567877778888--888887505788-77979732
Q gi|254781165|r 84 FHWKSLARQLRVRGLVEKYCDLASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKS--VQRYSSFYQEKE-IPRPVWWH 160 (201)
Q Consensus 84 f~w~~~~rQiRi~G~~~~l~~~~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~--~~~~~~~~~~~~-ip~P~~w~ 160 (201)
T Consensus 111 F~W~~LeRQVRVeG~~Ek~~~~~s~~YF~sRPr~S~IGAWaS~QS~vi~~R~~Le~kkv~~~~~~~~~~~~~iP~P~~WG 190 (231)
T TIGR00558 111 FFWPKLERQVRVEGKVEKIPAEESDKYFKSRPRGSRIGAWASEQSKVISDREELESKKVALKLEEKFEDAEDIPRPDYWG 190 (231)
T ss_pred EECHHHCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 20320287078610687648789988760598765022200122231230554477899999997322777887538888
Q ss_pred EEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCC
Q ss_conf 79997007996137898640269998815899707996289
Q gi|254781165|r 161 GFRICPLSIEFWSERPYRLHDRLLFSRETIAGKWTQFLLYP 201 (201)
Q Consensus 161 g~~i~P~~iEFw~~~~~rlHdR~~y~~~~~~~~W~~~~L~P 201 (201)
T Consensus 191 G~rv~P~~iEFWQGrpsRLHDR~~y~rkte~D~W~~~RLaP 231 (231)
T TIGR00558 191 GYRVVPEEIEFWQGRPSRLHDRIVYRRKTENDAWKRKRLAP 231 (231)
T ss_pred CEEEECCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEECCC
T ss_conf 65840453753008698401122221025688614544589