HHSEARCH alignment of GI: 254781165 and SCOP domain: d2i02a1

Alignment
>d2i02a1 b.45.1.1 (A:5-147) General stress protein 26 {Nostoc punctiforme pcc 73102 [TaxId: 63737]}
Probab=99.82  E-value=1.1e-19  Score=131.56  Aligned_cols=127  Identities=13%  Similarity=0.171  Sum_probs=100.9

Q ss_pred             CCCCCEEEEEEECCCCCEEEEEEEHHE-EECCE-EEEEECCCCCCHHHHHCCCCEEEEEECCCCEEEEEEEEEEECCCH-
Q ss_conf             889557999858599877322101300-00330-589951785201223118947999736664089999987521763-
Q gi|254781165|r   28 SHDPHAVVLATADRMGFPNARVVLIKH-FDQEG-FVFYTNSQSPKGKEILENPKASLCFHWKSLARQLRVRGLVEKYCD-  104 (201)
Q Consensus        28 ~~~p~a~~LaTvd~~g~p~~R~V~lr~-~~~~g-~~f~Tn~~S~K~~~l~~np~~al~f~w~~~~rQiRi~G~~~~l~~-  104 (201)
                      ..+.+.++|||++.+|.|++|.|.+.. .++++ +.|+|+..|+|+++|+.||+|+++|+++...++|+|+|+|+.+.+ 
T Consensus        14 l~~~~~~~laT~~~dG~P~~~pm~~~~~~~~~~~i~f~t~~~s~K~~~l~~np~vsl~~~~~~~~~~v~i~G~A~iv~d~   93 (143)
T d2i02a1          14 IKNIDYGMFTTVDDDGSLHSYPMSKSGDINSEATLWFFTYAGSHKVTEIEHHEQVNVSFSSPEQQRYVSISGTSQLVKDR   93 (143)
T ss_dssp             HTTCCEEEEEEECTTSCEEEEEEECBCC---CCEEEEEEETTSHHHHHHHHCCEEEEEEEETTTTEEEEEEEEEEEECCH
T ss_pred             HHCCCEEEEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEEECCH
T ss_conf             80899899999889999789878899861777289999378646666521486699999807888699999999998088


Q ss_pred             HHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEE
Q ss_conf             78889752388333502662177656787777888888888750578877979732799970079961378986402699
Q gi|254781165|r  105 LASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRICPLSIEFWSERPYRLHDRLL  184 (201)
Q Consensus       105 ~~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i~P~~iEFw~~~~~rlHdR~~  184 (201)
                      +..+++|+..                      +       ...+.+++  -.+.++.++|.|+++|||.+..++.++++.
T Consensus        94 ~~~~~~w~~~----------------------~-------~~~~~~g~--~~p~~~liri~p~~~~~wd~~~~~~p~~~~  142 (143)
T d2i02a1          94 NKMRELWKPE----------------------L-------QTWFPKGL--DEPDIALLKVNINQVNYWDSTSSFKPQTIS  142 (143)
T ss_dssp             HHHHHHCCGG----------------------G-------GGTCTTGG--GCTTEEEEEEEEEEEEEEEGGGTTSCEEEE
T ss_pred             HHHHHHHHHH----------------------H-------HHHCCCCC--CCCCEEEEEEEEEEEEEECCCCCCCCEEEE
T ss_conf             9999999999----------------------9-------98634799--999799999994099998589998863567


Q ss_pred             E
Q ss_conf             9
Q gi|254781165|r  185 F  185 (201)
Q Consensus       185 y  185 (201)
                      |
T Consensus       143 f  143 (143)
T d2i02a1         143 F  143 (143)
T ss_dssp             C
T ss_pred             C
T ss_conf             9


SCOP domain information

class: All beta proteins
fold: Split barrel-like
superfamily: FMN-binding split barrel
family: PNP-oxidase like
domain: General stress protein 26
species: Nostoc punctiforme pcc 73102 [TaxId: 63737]