HHsearch alignment for GI: 254781166 and conserved domain: CHL00194
>CHL00194 ycf39 Ycf39; Provisional.
Probab=98.96 E-value=3.7e-08 Score=73.06 Aligned_cols=199 Identities=17% Similarity=0.109 Sum_probs=118.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCE
Q ss_conf 89994889884179999999998898899984898899999999713892899988899999999999999998479889
Q gi|254781166|r 12 RGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEWGTIDF 91 (284)
Q Consensus 12 ~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~ 91 (284)
T Consensus 2 ~ILV~GATG~--lGr~vVr~Ll~~G~~Vr~lvRnp~ka~~l~~----~G-ve~v~gDl~dpesl~~Al-------~Gvda 67 (319)
T CHL00194 2 SLLVIGATGT--LGRQIVRRALDEGYQVKCLVRNLRKAAFLKE----WG-AELVYGDLSLPETIPPAL-------EGITA 67 (319)
T ss_pred EEEEECCCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----CC-CEEEEECCCCHHHHHHHH-------CCCCE
T ss_conf 7999899858--9999999999688908999578676323421----59-679994278877899996-------59967
Q ss_pred EEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCC-CCEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99627212742125862135899985564026402322346788741012-21000133323467720124454489999
Q gi|254781166|r 92 LVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNKG-GSMLTLTYLGADKVMPHYNCMGPAKAALQ 170 (284)
Q Consensus 92 lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~~-G~IInisS~~~~~~~p~~~~Y~asKaai~ 170 (284)
T Consensus 68 Vi~~~~~-~~~~----~~~~~~vd~~--------g~~~li~AAk---~aGVkr~V~lS~lga~~~-~~-~p~~~~K~~~E 129 (319)
T CHL00194 68 IIDASTS-RPSD----LNNAYQIDLE--------GKLALIEAAK---AAKVKRFIFFSILNAEQY-PQ-VPLMKIKSDIE 129 (319)
T ss_pred EEEECCC-CCCC----CCHHHHHHHH--------HHHHHHHHHH---HCCCCEEEEECCCCCCCC-CC-CHHHHHHHHHH
T ss_conf 9994566-7788----6208898898--------8999999999---849988999613566668-87-56778799999
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHH----H-HHCCCCCCCCCHHHHHHHHHHHHCHHHCCCC
Q ss_conf 9999999982774237998522387269456318993899999----9-8268899876699999999986098878868
Q gi|254781166|r 171 SAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKW----N-EYNSPLGRNITHDEVAKSALYLLSDFSSGVT 245 (284)
Q Consensus 171 ~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~----~-~~~~plgR~g~peeiA~av~fL~Sd~s~~iT 245 (284)
T Consensus 130 ~~L~~S--------gl~~TIlRPs~F~q~l~~~~a-~-pi~~~~~v~~~~~~~~i-a~I~~~DVA~~~a~aL~~~~~--~ 196 (319)
T CHL00194 130 EKLKQS--------GINYTIFRLAGFFQGLISQYA-I-PILDSQTIWITGESTPI-AYIDTQDAAKFALKSLSLPET--K 196 (319)
T ss_pred HHHHHC--------CCCEEEECCHHHHHHHHHHHH-H-HHHCCCCEEECCCCCCC-CCCCHHHHHHHHHHHHCCCCC--C
T ss_conf 999867--------998599847399998899876-7-76307857766998752-887799999999999589775--8
Q ss_pred CCEEEECCCC
Q ss_conf 8689975986
Q gi|254781166|r 246 GECHYVDAGY 255 (284)
Q Consensus 246 G~~i~vDGG~ 255 (284)
T Consensus 197 gk~y~L~GP~ 206 (319)
T CHL00194 197 NKTFPLVGPK 206 (319)
T ss_pred CCEEEEECCC
T ss_conf 9899954986