HHsearch alignment for GI: 254781166 and conserved domain: COG0169
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism].
Probab=97.34 E-value=0.0014 Score=43.24 Aligned_cols=77 Identities=18% Similarity=0.315 Sum_probs=53.4
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 299789994889884179999999998898-8999848988999999997138928999888999999999999999984
Q gi|254781166|r 8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGA-KVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEW 86 (284)
Q Consensus 8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (284)
T Consensus 124 ~~~~~vlilGAG---GAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~-~~~~~~~~~~~~---------- 189 (283)
T COG0169 124 VTGKRVLILGAG---GAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAV-EAAALADLEGLE---------- 189 (283)
T ss_pred CCCCEEEEECCC---HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCC----------
T ss_conf 678889998976---899999999998699879999588899999999864505631-102455412355----------
Q ss_pred CCCCEEEECCCCC
Q ss_conf 7988999627212
Q gi|254781166|r 87 GTIDFLVHAIAFS 99 (284)
Q Consensus 87 G~iD~lInnag~~ 99 (284)
T Consensus 190 -~~dliINaTp~G 201 (283)
T COG0169 190 -EADLLINATPVG 201 (283)
T ss_pred -CCCEEEECCCCC
T ss_conf -457899788787