HHsearch alignment for GI: 254781166 and conserved domain: COG1091

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane].
Probab=98.82  E-value=5.3e-08  Score=72.02  Aligned_cols=178  Identities=19%  Similarity=0.232  Sum_probs=121.0

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             99948898841799999999988988999848988999999997138928999888999999999999999984798899
Q gi|254781166|r   13 GIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEWGTIDFL   92 (284)
Q Consensus        13 ~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~l   92 (284)
T Consensus         3 iLi~G~~Gq--LG~~L~~~l~-~~~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~-----~PDvV   54 (281)
T COG1091           3 ILITGANGQ--LGTELRRALP-GEFEVIATDRAE--------------------LDITDPDAVLEVIRET-----RPDVV   54 (281)
T ss_pred             EEEECCCCH--HHHHHHHHHC-CCCEEEECCCCC--------------------CCCCCHHHHHHHHHHH-----CCCEE
T ss_conf             899769876--7999999717-784399515765--------------------5556858999999861-----99989


Q ss_pred             EECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCC---CCCCC--------CHHH
Q ss_conf             962721274212586213589998556402640232234678874101221000133323---46772--------0124
Q gi|254781166|r   93 VHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNKGGSMLTLTYLGA---DKVMP--------HYNC  161 (284)
Q Consensus        93 Innag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~~G~IInisS~~~---~~~~p--------~~~~  161 (284)
T Consensus        55 In~AAyt~vD--------~aE~~~e~A~~vNa~~~~~lA~aa~~---~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nv  123 (281)
T COG1091          55 INAAAYTAVD--------KAESEPELAFAVNATGAENLARAAAE---VGARLVHISTDYVFDGEKGGPYKETDTPNPLNV  123 (281)
T ss_pred             EECCCCCCCC--------CCCCCHHHHHHHHHHHHHHHHHHHHH---HCCEEEEEECCEEECCCCCCCCCCCCCCCCHHH
T ss_conf             9873203654--------13389899777677999999999997---197699963445743898988877899997024


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCC-CEEEEEECCCCCCCHHHHCCCCHH-HHHHHHHHCCCC-------CCCCCHHHHHHH
Q ss_conf             45448999999999999827742-379985223872694563189938-999999826889-------987669999999
Q gi|254781166|r  162 MGPAKAALQSAVRYLAMDLGRQS-GIRVNALSAGPAKTLASSGISDFR-YILKWNEYNSPL-------GRNITHDEVAKS  232 (284)
Q Consensus       162 Y~asKaai~~ltk~lA~elg~~~-gIRVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~~pl-------gR~g~peeiA~a  232 (284)
T Consensus       124 YG~sKl~GE~~v~~~~----~~~~I~Rts-wv~g~~g-------~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~  191 (281)
T COG1091         124 YGRSKLAGEEAVRAAG----PRHLILRTS-WVYGEYG-------NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADA  191 (281)
T ss_pred             HHHHHHHHHHHHHHHC----CCEEEEEEE-EEECCCC-------CCHHHHHHHHHHCCCCEEEECCEEECCCCHHHHHHH
T ss_conf             5477897899999739----987999856-5545888-------778999999850599269979845387469999999


Q ss_pred             HHHHHCHHH
Q ss_conf             998609887
Q gi|254781166|r  233 ALYLLSDFS  241 (284)
Q Consensus       233 v~fL~Sd~s  241 (284)
T Consensus       192 i~~ll~~~~  200 (281)
T COG1091         192 ILELLEKEK  200 (281)
T ss_pred             HHHHHHCCC
T ss_conf             999983455