HHsearch alignment for GI: 254781166 and conserved domain: COG3007
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown].
Probab=96.79 E-value=0.049 Score=33.14 Aligned_cols=239 Identities=18% Similarity=0.209 Sum_probs=125.4
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE-ECC------HH-----HHHHHHHHHHCCCC-EEEEECCCCCHHHHH
Q ss_conf 978999488988417999999999889889998-489------88-----99999999713892-899988899999999
Q gi|254781166|r 10 DKRGIVLGVANNRSLAWSIAKMCHAAGAKVALT-WQG------DA-----TKKRIEGLVEGMDF-FMAGHCNVSNSETID 76 (284)
Q Consensus 10 ~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~-~~~------~~-----~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~ 76 (284)
T Consensus 41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~ 119 (398)
T COG3007 41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ 119 (398)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHC-CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
T ss_conf 835999845876218899998747-8876366874158766887521336778999999856724331365310178999
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCC-CCCCC----------------CCCCC-------------CHHHHHHHHCCCCCH
Q ss_conf 9999999984798899962721274-21258----------------62135-------------899985564026402
Q gi|254781166|r 77 DVFRNLEKEWGTIDFLVHAIAFSDK-AELTG----------------PYINT-------------TRENFLNTMDVSVYS 126 (284)
Q Consensus 77 ~~~~~~~~~~G~iD~lInnag~~~~-~~~~~----------------~~~~~-------------~~e~~~~~~~vnl~~ 126 (284)
T Consensus 120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGe 199 (398)
T COG3007 120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGE 199 (398)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCC
T ss_conf 99999997616402799861474435898411257533120010255620256540012103665188888777722751
Q ss_pred HH-HHHHHHHH--HHCCCCCEECCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH
Q ss_conf 32-23467887--41012210001333234677201--244544899999999999982774237998522387269456
Q gi|254781166|r 127 FT-ALAARASS--LMNKGGSMLTLTYLGADKVMPHY--NCMGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLAS 201 (284)
Q Consensus 127 ~~-~~~k~~~~--~m~~~G~IInisS~~~~~~~p~~--~~Y~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~ 201 (284)
T Consensus 200 DWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG-~A~vsVlKavVTqAS 278 (398)
T COG3007 200 DWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGG-GARVSVLKAVVTQAS 278 (398)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHCHHHHHHHHHHHHHHCCC-CEEEEEHHHHHHHHH
T ss_conf 2999999987434003676178887217765443241462036542578899999999875279-715630588886665
Q ss_pred HCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCEEEECCC
Q ss_conf 31899389999998268899876699999999986098878868868997598
Q gi|254781166|r 202 SGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFSSGVTGECHYVDAG 254 (284)
Q Consensus 202 ~~~~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~s~~iTG~~i~vDGG 254 (284)
T Consensus 279 saIP~~plYla~lfk--vMKekg~HEgcIeQi~rlfse~-ly-~g~~~~~D~e 327 (398)
T COG3007 279 SAIPMMPLYLAILFK--VMKEKGTHEGCIEQIDRLFSEK-LY-SGSKIQLDDE 327 (398)
T ss_pred HCCCCCCHHHHHHHH--HHHHCCCCHHHHHHHHHHHHHH-HH-CCCCCCCCCC
T ss_conf 406665189999999--9987386345899999999987-51-7999884831