HHsearch alignment for GI: 254781166 and conserved domain: COG3007

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown].
Probab=96.79  E-value=0.049  Score=33.14  Aligned_cols=239  Identities=18%  Similarity=0.209  Sum_probs=125.4

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE-ECC------HH-----HHHHHHHHHHCCCC-EEEEECCCCCHHHHH
Q ss_conf             978999488988417999999999889889998-489------88-----99999999713892-899988899999999
Q gi|254781166|r   10 DKRGIVLGVANNRSLAWSIAKMCHAAGAKVALT-WQG------DA-----TKKRIEGLVEGMDF-FMAGHCNVSNSETID   76 (284)
Q Consensus        10 ~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~-~~~------~~-----~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~   76 (284)
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHC-CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
T ss_conf             835999845876218899998747-8876366874158766887521336778999999856724331365310178999


Q ss_pred             HHHHHHHHHHCCCCEEEECCCCCCC-CCCCC----------------CCCCC-------------CHHHHHHHHCCCCCH
Q ss_conf             9999999984798899962721274-21258----------------62135-------------899985564026402
Q gi|254781166|r   77 DVFRNLEKEWGTIDFLVHAIAFSDK-AELTG----------------PYINT-------------TRENFLNTMDVSVYS  126 (284)
Q Consensus        77 ~~~~~~~~~~G~iD~lInnag~~~~-~~~~~----------------~~~~~-------------~~e~~~~~~~vnl~~  126 (284)
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGe  199 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGE  199 (398)
T ss_pred             HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCC
T ss_conf             99999997616402799861474435898411257533120010255620256540012103665188888777722751


Q ss_pred             HH-HHHHHHHH--HHCCCCCEECCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH
Q ss_conf             32-23467887--41012210001333234677201--244544899999999999982774237998522387269456
Q gi|254781166|r  127 FT-ALAARASS--LMNKGGSMLTLTYLGADKVMPHY--NCMGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLAS  201 (284)
Q Consensus       127 ~~-~~~k~~~~--~m~~~G~IInisS~~~~~~~p~~--~~Y~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~  201 (284)
T Consensus       200 DWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG-~A~vsVlKavVTqAS  278 (398)
T COG3007         200 DWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGG-GARVSVLKAVVTQAS  278 (398)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHCHHHHHHHHHHHHHHCCC-CEEEEEHHHHHHHHH
T ss_conf             2999999987434003676178887217765443241462036542578899999999875279-715630588886665


Q ss_pred             HCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCEEEECCC
Q ss_conf             31899389999998268899876699999999986098878868868997598
Q gi|254781166|r  202 SGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFSSGVTGECHYVDAG  254 (284)
Q Consensus       202 ~~~~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~s~~iTG~~i~vDGG  254 (284)
T Consensus       279 saIP~~plYla~lfk--vMKekg~HEgcIeQi~rlfse~-ly-~g~~~~~D~e  327 (398)
T COG3007         279 SAIPMMPLYLAILFK--VMKEKGTHEGCIEQIDRLFSEK-LY-SGSKIQLDDE  327 (398)
T ss_pred             HCCCCCCHHHHHHHH--HHHHCCCCHHHHHHHHHHHHHH-HH-CCCCCCCCCC
T ss_conf             406665189999999--9987386345899999999987-51-7999884831