HHsearch alignment for GI: 254781166 and conserved domain: PRK03803
>PRK03803 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=94.53 E-value=0.29 Score=28.07 Aligned_cols=38 Identities=21% Similarity=0.301 Sum_probs=31.5
Q ss_pred HCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 22997899948898841799999999988988999848988
Q gi|254781166|r 7 LMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDA 47 (284)
Q Consensus 7 ~L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~ 47 (284)
T Consensus 4 ~~~~~~~LV~G~G~---sG~s~a~~L~~~G~~V~~~D~~~~ 41 (448)
T PRK03803 4 IASDGLRIVVGLGK---SGMSLVRFLARQGYQFAVTDTREN 41 (448)
T ss_pred EECCCCEEEEEECH---HHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 60599589999899---999999999978895999918999