HHsearch alignment for GI: 254781166 and conserved domain: PRK05134
>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional.
Probab=92.91 E-value=0.52 Score=26.43 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=64.7
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCC-EEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 299789994889884179999999998898899984898899999999713892-8999888999999999999999984
Q gi|254781166|r 8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDF-FMAGHCNVSNSETIDDVFRNLEKEW 86 (284)
Q Consensus 8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (284)
T Consensus 47 l~G~~ILDVGCGg--G~---lse~LAr~Ga~VtGID~S~~~I~~Ar~ha~~~~l~i~y~~~~~e~------l~~---~~~ 112 (233)
T PRK05134 47 LFGKRVLDVGCGG--GI---LSESMARLGATVTGIDASEENIEVARLHALESGLKIDYRQITAEE------LAA---EHP 112 (233)
T ss_pred CCCCEEEEECCCC--CH---HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHH------HHH---HCC
T ss_conf 6899899975589--71---128999679979998799899999999856443451167514766------543---057
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEECCC
Q ss_conf 79889996272127421258621358999855640264023223467887410122100013
Q gi|254781166|r 87 GTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNKGGSMLTLT 148 (284)
Q Consensus 87 G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~~G~IInis 148 (284)
T Consensus 113 ~~FDvV~~~EV---------------lEH--------V~d~~~~l~~~~rlLKPGG~l~lsT 151 (233)
T PRK05134 113 GQFDVVTCMEM---------------LEH--------VPDPASFIRACAKLVKPGGLVFFST 151 (233)
T ss_pred CCEEEEEEEHH---------------HHH--------CCCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 86347744214---------------775--------3899999999999738991499972