HHsearch alignment for GI: 254781166 and conserved domain: PRK05872

Probab=100.00  E-value=0  Score=362.17  Aligned_cols=231  Identities=17%  Similarity=0.187  Sum_probs=202.1

Q ss_pred             CCCCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf             95512322997899948898841799999999988988999848988999999997138928999888999999999999
Q gi|254781166|r    1 MLVVDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFR   80 (284)
Q Consensus         1 m~~~~~~L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   80 (284)
T Consensus         1 mp~M~~-L~gKvalITGass--GIG~aiA~~la~~Ga~Vvl~dr~~~~l~~~~~~l--g~~~~~~~~DVtd~~~v~~~v~   75 (296)
T PRK05872          1 MPPMTS-LDGKVVFVTGAAR--GVGAELARRLHARGAKVALVDLEEAELAALAAEL--GDRVLTVVADVTDLAAMQAAAE   75 (296)
T ss_pred             CCCCCC-CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--CCCEEEEEEECCCHHHHHHHHH
T ss_conf             979988-5998799927105--8999999999987998999989999999999983--8873899982799999999999


Q ss_pred             HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHC-CCCCEECCCCCCCCCCCCCH
Q ss_conf             99998479889996272127421258621358999855640264023223467887410-12210001333234677201
Q gi|254781166|r   81 NLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMN-KGGSMLTLTYLGADKVMPHY  159 (284)
Q Consensus        81 ~~~~~~G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~-~~G~IInisS~~~~~~~p~~  159 (284)
T Consensus        76 ~i~~~~G~iDiLVnNAGi~~----~~~~~~~~~e~~~~v~dVNl~G~~~~~ra~lp~m~~~~G~IVnisS~ag~~~~p~~  151 (296)
T PRK05872         76 EAVERFGGIDVVVANAGIAS----YGSVLQVDPAAFRRVIDVNLLGVFHTVRATLPAVIERRGYVLQVSSLAAFAAAPGM  151 (296)
T ss_pred             HHHHHHCCCCEEEECCCCCC----CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCC
T ss_conf             99997199878765562579----97642199899725842445999999999999999779989999605432458998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHC--CCCCCCCCHHHHHHHHHHHH
Q ss_conf             2445448999999999999827742379985223872694563189938999999826--88998766999999999860
Q gi|254781166|r  160 NCMGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYN--SPLGRNITHDEVAKSALYLL  237 (284)
Q Consensus       160 ~~Y~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~--~plgR~g~peeiA~av~fL~  237 (284)
T Consensus       152 ~aY~ASKaav~~~t~sLa~Ela~~-GIrVn~V~PG~V~T~m~r~a~~~~~~~~~~~~~~p~p~~~~~~~~~~a~~i~~~i  230 (296)
T PRK05872        152 APYCASKAGVEAFANALRLEVAHR-GVSVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLNRTTSVEKCAAAFVDGI  230 (296)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             079999999999999999984001-9389999708897756747664575567886128998788659999999999998


Q ss_pred             CHHH
Q ss_conf             9887
Q gi|254781166|r  238 SDFS  241 (284)
Q Consensus       238 Sd~s  241 (284)
T Consensus       231 ~r~~  234 (296)
T PRK05872        231 ERRA  234 (296)
T ss_pred             HCCC
T ss_conf             4488