HHsearch alignment for GI: 254781166 and conserved domain: PRK05876

Probab=100.00  E-value=0  Score=336.07  Aligned_cols=226  Identities=15%  Similarity=0.161  Sum_probs=186.7

Q ss_pred             CCHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf             1232299789994889884179999999998898899984898899999999-713892899988899999999999999
Q gi|254781166|r    4 VDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGL-VEGMDFFMAGHCNVSNSETIDDVFRNL   82 (284)
Q Consensus         4 ~~~~L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (284)
T Consensus         1 M~~-~~gKvavITGaas--GIG~a~A~~la~~Ga~Vvi~d~~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~l~~~~   77 (275)
T PRK05876          1 MDG-FPGRGAVITGGAS--GIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEA   77 (275)
T ss_pred             CCC-CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf             959-8998799928266--9999999999987998999979889999999999826984799978889999999999999


Q ss_pred             HHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHC---CCCCEECCCCCCCCCCCCCH
Q ss_conf             998479889996272127421258621358999855640264023223467887410---12210001333234677201
Q gi|254781166|r   83 EKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMN---KGGSMLTLTYLGADKVMPHY  159 (284)
Q Consensus        83 ~~~~G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~---~~G~IInisS~~~~~~~p~~  159 (284)
T Consensus        78 ~~~~G~iDilvnNAGi~~~----~~~~~~~~~~w~~~~~vNl~g~~~~~~~~lP~m~~~g~~G~IvntsS~agl~~~~~~  153 (275)
T PRK05876         78 FRLLGHVDVVFSNAGIVVG----GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGL  153 (275)
T ss_pred             HHHHCCCCEEECCCCCCCC----CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCC
T ss_conf             9984898851215744689----872329999999987641389999999999999981999499996867753899997


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCC---HHH-HHHHHHHC--CCC-CCCCCHHHHHHH
Q ss_conf             24454489999999999998277423799852238726945631899---389-99999826--889-987669999999
Q gi|254781166|r  160 NCMGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISD---FRY-ILKWNEYN--SPL-GRNITHDEVAKS  232 (284)
Q Consensus       160 ~~Y~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~---~~~-~~~~~~~~--~pl-gR~g~peeiA~a  232 (284)
T Consensus       154 ~~Y~asK~av~~lte~La~El~~~-gI~V~~l~Pg~V~T~m~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~vA~~  232 (275)
T PRK05876        154 GAYGVAKYGVVGLAETLAREVTAD-GIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQL  232 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHH
T ss_conf             469999999999999999985112-9389999718899434668652367534544433454320110269999999999


Q ss_pred             HHHHH
Q ss_conf             99860
Q gi|254781166|r  233 ALYLL  237 (284)
Q Consensus       233 v~fL~  237 (284)
T Consensus       233 v~~~i  237 (275)
T PRK05876        233 TADAI  237 (275)
T ss_pred             HHHHH
T ss_conf             99999