HHsearch alignment for GI: 254781166 and conserved domain: PRK06398

Probab=100.00  E-value=0  Score=457.29  Aligned_cols=244  Identities=25%  Similarity=0.351  Sum_probs=212.5

Q ss_pred             CCHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             12322997899948898841799999999988988999848988999999997138928999888999999999999999
Q gi|254781166|r    4 VDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLE   83 (284)
Q Consensus         4 ~~~~L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (284)
T Consensus         1 M~~-L~gKvalVTGgs~--GIG~aia~~la~~Ga~V~~~~~~~~~~---------~~~~~~i~~Dvt~~~~v~~~v~~~~   68 (256)
T PRK06398          1 MRD-LRDKVVIVTGGSS--GIGLAIVSRFVDEGSKVVSISRSEPED---------INKSDHIKCDVTNEDEVKNAINEIS   68 (256)
T ss_pred             CCC-CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCCCC---------CCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf             989-9989899968787--899999999998699999994875125---------1722389854799999999999999


Q ss_pred             HHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHC--CCCCEECCCCCCCCCCCCCHHH
Q ss_conf             98479889996272127421258621358999855640264023223467887410--1221000133323467720124
Q gi|254781166|r   84 KEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMN--KGGSMLTLTYLGADKVMPHYNC  161 (284)
Q Consensus        84 ~~~G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~--~~G~IInisS~~~~~~~p~~~~  161 (284)
T Consensus        69 ~~~G~iDiLVNNAG~~~----~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~~~~~~~~~~~  144 (256)
T PRK06398         69 KKYGRIDVLVNNAGIEK----YGSLHKTDSGTWRRIIDVNVNGVYYMSKEVIPHMLRSGTGSIVNISSVQADIATKNAAA  144 (256)
T ss_pred             HHCCCCCEEEECCCCCC----CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHH
T ss_conf             98399979998999999----99904499999999999973628999999999999839957999804020777999689


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCC------CCHHHH---HHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             4544899999999999982774237998522387269456318------993899---9999826889987669999999
Q gi|254781166|r  162 MGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGI------SDFRYI---LKWNEYNSPLGRNITHDEVAKS  232 (284)
Q Consensus       162 Y~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~------~~~~~~---~~~~~~~~plgR~g~peeiA~a  232 (284)
T Consensus       145 Y~asKaal~~ltrslA~ela~-~-IrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~peeiA~~  222 (256)
T PRK06398        145 YVTSKHALIGLTKSIAVDYAP-L-IRCNAVCPGTIDTPLVDKAAELEVGKDPEAIERKILEWGNLHPMGRIGRPEEVASV  222 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHCC-C-CEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf             999999999999999999779-9-88999973788861667676643268989999999976457898897789999999


Q ss_pred             HHHHHCHHHCCCCCCEEEECCCCCEECCCCCCCCC
Q ss_conf             99860988788688689975986613058756888
Q gi|254781166|r  233 ALYLLSDFSSGVTGECHYVDAGYHIVGMKAEDAPD  267 (284)
Q Consensus       233 v~fL~Sd~s~~iTG~~i~vDGG~s~~g~~~~~~~~  267 (284)
T Consensus       223 v~FLaSd~as~iTG~~i~VDGG~t~~~--p~~~p~  255 (256)
T PRK06398        223 VAFLASDESSFITGTCLYVDGGLSVLA--PISTPD  255 (256)
T ss_pred             HHHHHCCHHCCCCCCEEEECCCHHHCC--CCCCCC
T ss_conf             999948453383386177893932186--212589