HHsearch alignment for GI: 254781166 and conserved domain: PRK07479

Probab=100.00  E-value=0  Score=452.07  Aligned_cols=244  Identities=25%  Similarity=0.312  Sum_probs=223.2

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             2997899948898841799999999988988999848988999999997-138928999888999999999999999984
Q gi|254781166|r    8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLV-EGMDFFMAGHCNVSNSETIDDVFRNLEKEW   86 (284)
Q Consensus         8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (284)
T Consensus         3 L~gK~alITGgs~--GIG~a~a~~la~~G~~V~i~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~~~   80 (252)
T PRK07479          3 LSGKVAIVTGAGS--GFGEGIAKRFAREGAKVVVADLNAAAAERVASEIADAGGNAIAVAADVSRGADVEALVEAALEAF   80 (252)
T ss_pred             CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf             7998899938876--89999999999879999999798999999999998539978999925899999999999999981


Q ss_pred             CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC--CCCEECCCCCCCCCCCCCHHHHHH
Q ss_conf             798899962721274212586213589998556402640232234678874101--221000133323467720124454
Q gi|254781166|r   87 GTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNK--GGSMLTLTYLGADKVMPHYNCMGP  164 (284)
Q Consensus        87 G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~--~G~IInisS~~~~~~~p~~~~Y~a  164 (284)
T Consensus        81 G~iD~lVnnAG~~~~---~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  157 (252)
T PRK07479         81 GRVDIVVNNAGTTHR---NKPMLDVTEAEFDRVYAVNVKSIYLSTRHFVPHFRAQGGGVIINIASTAGVRPRPGLTWYNA  157 (252)
T ss_pred             CCCCEEEECCCCCCC---CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCHHHH
T ss_conf             998599989976689---98827699999999999986310565444049898679972999804876689999717999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCC---CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHH
Q ss_conf             4899999999999982774237998522387269456318---9938999999826889987669999999998609887
Q gi|254781166|r  165 AKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGI---SDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFS  241 (284)
Q Consensus       165 sKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~---~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~s  241 (284)
T Consensus       158 sKaal~~ltr~lA~el~~~-gIrVN~I~Pg~~~T~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedia~~v~fL~S~~s  236 (252)
T PRK07479        158 SKGAVITATKAMAAELAPD-NIRVNCLNPVAGETGLLTEFMGVEDTPENRAKFLATIPLGRFSTPQDVANAALYLASDEA  236 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHH-CEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHH
T ss_conf             9999999999999995140-969999966978765788761379989999999707998998099999999999968443


Q ss_pred             CCCCCCEEEECCCCCE
Q ss_conf             8868868997598661
Q gi|254781166|r  242 SGVTGECHYVDAGYHI  257 (284)
Q Consensus       242 ~~iTG~~i~vDGG~s~  257 (284)
T Consensus       237 ~~iTGq~i~VDGG~si  252 (252)
T PRK07479        237 SFITGVCLEVDGGRCI  252 (252)
T ss_pred             CCCCCCEEEECCCCCC
T ss_conf             2946881885989609