HHsearch alignment for GI: 254781166 and conserved domain: PRK12549
>PRK12549 shikimate 5-dehydrogenase; Reviewed.
Probab=96.74 E-value=0.025 Score=35.07 Aligned_cols=76 Identities=17% Similarity=0.174 Sum_probs=50.3
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHH-CCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 299789994889884179999999998898-89998489889999999971-3892899988899999999999999998
Q gi|254781166|r 8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGA-KVALTWQGDATKKRIEGLVE-GMDFFMAGHCNVSNSETIDDVFRNLEKE 85 (284)
Q Consensus 8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (284)
T Consensus 125 ~~~~~vlilGaG---Gaa~ai~~al~~~g~~~i~I~nR~~~r~~~l~~~l~~~~~~-----~~~~~~~~~~-------~~ 189 (284)
T PRK12549 125 ASLERVVQLGAG---GAGAAVAHALLTLGVERLTLFDVDPARAQALADELNARFPA-----ARVTAGSDLA-------AA 189 (284)
T ss_pred CCCCEEEEECCC---CHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCC-----CEEEECHHHH-------HH
T ss_conf 355718996566---16899999999769998999979889999999999865798-----6376416767-------65
Q ss_pred HCCCCEEEECCCC
Q ss_conf 4798899962721
Q gi|254781166|r 86 WGTIDFLVHAIAF 98 (284)
Q Consensus 86 ~G~iD~lInnag~ 98 (284)
T Consensus 190 ~~~~d~iINaTp~ 202 (284)
T PRK12549 190 LAAADGLVHATPT 202 (284)
T ss_pred HHHCCEEEECCCC
T ss_conf 4213826657898