HHsearch alignment for GI: 254781166 and conserved domain: PRK12939
>PRK12939 short chain dehydrogenase; Provisional.
Probab=100.00 E-value=0 Score=466.25 Aligned_cols=246 Identities=24% Similarity=0.266 Sum_probs=224.9
Q ss_pred CCHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HCCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 12322997899948898841799999999988988999848988999999997-13892899988899999999999999
Q gi|254781166|r 4 VDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLV-EGMDFFMAGHCNVSNSETIDDVFRNL 82 (284)
Q Consensus 4 ~~~~L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (284)
T Consensus 1 M~~~L~~KvalVTGgs--~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~~~~~~~~~ 78 (250)
T PRK12939 1 MASSLAGKRALVTGAA--RGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAA 78 (250)
T ss_pred CCCCCCCCEEEEECCC--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH
T ss_conf 9999999879995836--68999999999987999999969889999999999955990999992489999999999999
Q ss_pred HHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC--CCCEECCCCCCCCCCCCCHH
Q ss_conf 9984798899962721274212586213589998556402640232234678874101--22100013332346772012
Q gi|254781166|r 83 EKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNK--GGSMLTLTYLGADKVMPHYN 160 (284)
Q Consensus 83 ~~~~G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~--~G~IInisS~~~~~~~p~~~ 160 (284)
T Consensus 79 ~~~~g~iDiLVNNAG~~~----~~~~~~~~~e~~~~~~~iNl~~~~~~~k~~~~~m~~~~~G~IInisS~~~~~~~~~~~ 154 (250)
T PRK12939 79 AAALGGLDGLVNNAGITN----SKSATELDIDTWDAVMNVNVRGTFLMSRAALPHLRDSGRGRIVNLASDTALWGAPKLL 154 (250)
T ss_pred HHHCCCCCEEEECCCCCC----CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCH
T ss_conf 997499979998877899----9990349999999999998299999999999999984993799980677676899858
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHH
Q ss_conf 44544899999999999982774237998522387269456318993899999982688998766999999999860988
Q gi|254781166|r 161 CMGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDF 240 (284)
Q Consensus 161 ~Y~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~ 240 (284)
T Consensus 155 ~Y~asKaal~~ltk~lA~e~a~~-~IrvN~V~PG~i~T~~~~~~~~~-e~~~~~~~~~Pl~R~g~pedia~~v~fL~S~~ 232 (250)
T PRK12939 155 AYVASKGAVIGMTRSLARELGGR-GITVNAIAPGLTATEATAYVPAE-ERHAYYLQGRALERLQVPDDVAGAVLFLLSDA 232 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-CEEEEEEEECCCCCHHHHCCCCH-HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCH
T ss_conf 89999999999999999996032-93999887677987032258988-99999985799999809999999999994816
Q ss_pred HCCCCCCEEEECCCCCE
Q ss_conf 78868868997598661
Q gi|254781166|r 241 SSGVTGECHYVDAGYHI 257 (284)
Q Consensus 241 s~~iTG~~i~vDGG~s~ 257 (284)
T Consensus 233 s~~itG~~i~VDGG~~m 249 (250)
T PRK12939 233 ARFVTGQLLPVNGGFVM 249 (250)
T ss_pred HCCCCCCEEEECCCHHC
T ss_conf 46905882897958421