HHsearch alignment for GI: 254781166 and conserved domain: PRK13940
>PRK13940 glutamyl-tRNA reductase; Provisional.
Probab=96.17 E-value=0.06 Score=32.56 Aligned_cols=74 Identities=12% Similarity=0.141 Sum_probs=49.3
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 2997899948898841799999999988988-999848988999999997138928999888999999999999999984
Q gi|254781166|r 8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGAK-VALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEW 86 (284)
Q Consensus 8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~-Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (284)
T Consensus 179 l~~~~vlvvGaGe---m~~l~~k~L~~~g~~~i~v~nRt~~ra~~la~~~---~~~-----~~~~~~~-------l~~~l 240 (414)
T PRK13940 179 ISSKNVLIIGAGQ---TGELLFRHVTALAPKQIMLANRTIEKAQKITSAF---RNA-----SAHYLSE-------LPQLI 240 (414)
T ss_pred CCCCEEEEECCCH---HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH---CCC-----CCCCHHH-------HHHHH
T ss_conf 1228389966864---7899999999769987999457567799999970---888-----5016999-------99998
Q ss_pred CCCCEEEECCCCC
Q ss_conf 7988999627212
Q gi|254781166|r 87 GTIDFLVHAIAFS 99 (284)
Q Consensus 87 G~iD~lInnag~~ 99 (284)
T Consensus 241 ~~aDivisaT~a~ 253 (414)
T PRK13940 241 KKADIIIAAVNVL 253 (414)
T ss_pred HHCCEEEEECCCC
T ss_conf 6388799816982