HHsearch alignment for GI: 254781166 and conserved domain: TIGR02632
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; InterPro: IPR013454 Rhamnose is a methyl-pentose sugar which is found as a constituent of pectin within the cell walls of dicotyledonous plants and has also been found in the mucilage of a number of legume plants . RhaD from Rhizobium leguminosarum bv. trifolii is encoded by a gene occurring in a rhamnose utilisation cluster, and is necessary for growth on this compound . This protein is predicted to be a bifunctional NAD-dependent aldolase/dehydrogenase..
Probab=100.00 E-value=0 Score=339.71 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=218.4
Q ss_pred CCCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HCC--CCEEE------------EE
Q ss_conf 5512322997899948898841799999999988988999848988999999997-138--92899------------98
Q gi|254781166|r 2 LVVDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLV-EGM--DFFMA------------GH 66 (284)
Q Consensus 2 ~~~~~~L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~-~~~--~~~~~------------~~ 66 (284)
T Consensus 416 mP~ek~LA~~Va~VtGGas--GIG~~~A~rL~~eGAhvV~aD~d~~~a~~va~~~~~~fG~d~a~AGsdisaCGPaiGl~ 493 (709)
T TIGR02632 416 MPKEKELARRVAFVTGGAS--GIGRETARRLVDEGAHVVLADLDAEAAEAVAAEIVDKFGADKAVAGSDISACGPAIGLK 493 (709)
T ss_pred CCCCCCCCCEEEEEECCCC--CHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCHHCCCCCEEEE
T ss_conf 7659671570688973886--52689999997369779996236578999999986313888121143200046710027
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC-HHHHHHHHCCCCCHHHHHHHHHHHHHCC---CC
Q ss_conf 8899999999999999998479889996272127421258621358-9998556402640232234678874101---22
Q gi|254781166|r 67 CNVSNSETIDDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTT-RENFLNTMDVSVYSFTALAARASSLMNK---GG 142 (284)
Q Consensus 67 ~Dv~~~~~v~~~~~~~~~~~G~iD~lInnag~~~~~~~~~~~~~~~-~e~~~~~~~vnl~~~~~~~k~~~~~m~~---~G 142 (284)
T Consensus 494 ~DvT~e~~v~~~f~~v~~~yGGvD~vv~nAGi~~S----~p~~~t~r~~~W~l~~di~atG~FLVareA~r~~~~Q~lGG 569 (709)
T TIGR02632 494 LDVTDEEAVKAAFAEVALAYGGVDIVVNNAGIAVS----SPLEETERLEEWDLNLDILATGYFLVAREAARLMRKQGLGG 569 (709)
T ss_pred EEECCHHHHHHHHHHHHHHHCCEEEEEECCCHHCC----CCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCC
T ss_conf 63175899999999999974984787652530105----77023221554320120101200358889999997317985
Q ss_pred CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-------CHHH------HCCC----
Q ss_conf 1000133323467720124454489999999999998277423799852238726-------9456------3189----
Q gi|254781166|r 143 SMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAK-------TLAS------SGIS---- 205 (284)
Q Consensus 143 ~IInisS~~~~~~~p~~~~Y~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~-------T~~~------~~~~---- 205 (284)
T Consensus 570 ~~VfiaSkNav~A~kn~~AY~aaKA~~~Hl~R~LA~Ela~-~GiRVNtV~PdaVl~GS~if~~~W~~~raA~ygi~ftad 648 (709)
T TIGR02632 570 NIVFIASKNAVVAGKNASAYSAAKAAEAHLARCLAAELAE-LGIRVNTVNPDAVLRGSGIFDGEWREERAAAYGIPFTAD 648 (709)
T ss_pred CEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC-CCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 5677611000111788405558999999899999981478-864640106500110552153367888887707743468
Q ss_pred -----CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCEEEECCCCCE
Q ss_conf -----9389999998268899876699999999986098878868868997598661
Q gi|254781166|r 206 -----DFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFSSGVTGECHYVDAGYHI 257 (284)
Q Consensus 206 -----~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~s~~iTG~~i~vDGG~s~ 257 (284)
T Consensus 649 ePtdvl~d~L~~fY~~RslLk~~v~p~d~AeAvf~L~S~~~~~tTG~~i~VDaG~~~ 705 (709)
T TIGR02632 649 EPTDVLADKLEEFYAKRSLLKREVLPADIAEAVFFLASDKLEKTTGLIITVDAGVAA 705 (709)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCC
T ss_conf 723578888988987543237766808899999997345101027866403777522