HHsearch alignment for GI: 254781166 and conserved domain: TIGR03206
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=100.00 E-value=0 Score=467.28 Aligned_cols=243 Identities=21% Similarity=0.280 Sum_probs=222.6
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 2997899948898841799999999988988999848988999999997-138928999888999999999999999984
Q gi|254781166|r 8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLV-EGMDFFMAGHCNVSNSETIDDVFRNLEKEW 86 (284)
Q Consensus 8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (284)
T Consensus 1 L~gKvalITG~s~--GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv~d~~~v~~~v~~~~~~~ 78 (250)
T TIGR03206 1 LKDKTAIVTGGGG--GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 9519999968576--89999999999879999999798899999999999539928999944899999999999999975
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHC--CCCCEECCCCCCCCCCCCCHHHHHH
Q ss_conf 79889996272127421258621358999855640264023223467887410--1221000133323467720124454
Q gi|254781166|r 87 GTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMN--KGGSMLTLTYLGADKVMPHYNCMGP 164 (284)
Q Consensus 87 G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~--~~G~IInisS~~~~~~~p~~~~Y~a 164 (284)
T Consensus 79 G~iDilvnnAg~~~----~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~~~~~~~~~~~Y~a 154 (250)
T TIGR03206 79 GPVDVLVNNAGWDK----FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAA 154 (250)
T ss_pred CCCCEEEECCCCCC----CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHH
T ss_conf 99979998988899----98903499999999999982999999999999999749917999655775768998588999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCC----CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHH
Q ss_conf 4899999999999982774237998522387269456318----993899999982688998766999999999860988
Q gi|254781166|r 165 AKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGI----SDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDF 240 (284)
Q Consensus 165 sKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~----~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~ 240 (284)
T Consensus 155 sKaav~~ltk~lA~ela~~-gIrVNaV~PG~i~T~~~~~~~~~~~~~e~~~~~~~~~~Pl~R~g~pediA~~v~fL~Sd~ 233 (250)
T TIGR03206 155 CKGGLVAFSKTMAREHARH-GITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDD 233 (250)
T ss_pred HHHHHHHHHHHHHHHHCCC-CEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCH
T ss_conf 9999999999999996532-918999976888867789876443886999999984799899839999999999995834
Q ss_pred HCCCCCCEEEECCCCCE
Q ss_conf 78868868997598661
Q gi|254781166|r 241 SSGVTGECHYVDAGYHI 257 (284)
Q Consensus 241 s~~iTG~~i~vDGG~s~ 257 (284)
T Consensus 234 s~~itG~~i~VDGG~t~ 250 (250)
T TIGR03206 234 ASFITGQVLSVSGGLTM 250 (250)
T ss_pred HCCCCCCEEEECCCEEC
T ss_conf 33845883886869049