HHsearch alignment for GI: 254781166 and conserved domain: TIGR03451
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=97.34 E-value=0.0049 Score=39.67 Aligned_cols=101 Identities=15% Similarity=0.129 Sum_probs=66.7
Q ss_pred HCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 2299789994889884179999999998898-899984898899999999713892899988899999999999999998
Q gi|254781166|r 7 LMKDKRGIVLGVANNRSLAWSIAKMCHAAGA-KVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKE 85 (284)
Q Consensus 7 ~L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (284)
T Consensus 174 ~~~g~~VlV~GaG---~iGl~a~~~ak~~Ga~~Vi~~d~~~~rl~~A~~l----Ga~~~i--~~~~~~~----~~~v~~~ 240 (358)
T TIGR03451 174 VKRGDSVAVIGCG---GVGDAAIAGAALAGASKIIAVDIDDRKLEWAREF----GATHTV--NSSGTDP----VEAIRAL 240 (358)
T ss_pred CCCCCEEEEECCC---HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHC----CCEEEE--CCCCCCH----HHHHHHH
T ss_conf 9999889996737---6999999999983991899991988999999965----990997--3998788----9999998
Q ss_pred HC--CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEECCCC
Q ss_conf 47--98899962721274212586213589998556402640232234678874101221000133
Q gi|254781166|r 86 WG--TIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNKGGSMLTLTY 149 (284)
Q Consensus 86 ~G--~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~~G~IInisS 149 (284)
T Consensus 241 t~g~G~Dvvie~~G~--------------~~~---------------~~~al~~~~~gG~iv~~G~ 277 (358)
T TIGR03451 241 TGGFGADVVIDAVGR--------------PET---------------YKQAFYARDLAGTVVLVGV 277 (358)
T ss_pred HCCCCCCEEEECCCC--------------HHH---------------HHHHHHHHCCCCEEEEEEC
T ss_conf 589887499999999--------------899---------------9999997627969999922