HHsearch alignment for GI: 254781166 and conserved domain: cd01078
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.52 E-value=7.5e-07 Score=64.54 Aligned_cols=83 Identities=17% Similarity=0.174 Sum_probs=60.3
Q ss_pred CCHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-CCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 123229978999488988417999999999889889998489889999999971-3892899988899999999999999
Q gi|254781166|r 4 VDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVE-GMDFFMAGHCNVSNSETIDDVFRNL 82 (284)
Q Consensus 4 ~~~~L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (284)
T Consensus 22 ~g~dl~g~~~~V~G~tG--~vG~~~A~~lA~~Ga~v~lv~R~~ek~~~~a~~i~~r~g~-~~~~~~~~~~~~~~~~l--- 95 (194)
T cd01078 22 MGKDLKGKTAVVLGGTG--PVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGE-GVGAVETSDDAARAAAI--- 95 (194)
T ss_pred HCCCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHH---
T ss_conf 29986798899985885--7899999999983997999958788899999999997098-73113578877899774---
Q ss_pred HHHHCCCCEEEECC
Q ss_conf 99847988999627
Q gi|254781166|r 83 EKEWGTIDFLVHAI 96 (284)
Q Consensus 83 ~~~~G~iD~lInna 96 (284)
T Consensus 96 ----~~adiV~~a~ 105 (194)
T cd01078 96 ----KGADVVFAAG 105 (194)
T ss_pred ----CCCCEEEECC
T ss_conf ----6698999642