HHsearch alignment for GI: 254781166 and conserved domain: pfam01488
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=97.43 E-value=0.00071 Score=45.12 Aligned_cols=76 Identities=16% Similarity=0.196 Sum_probs=51.4
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 299789994889884179999999998898-8999848988999999997138928999888999999999999999984
Q gi|254781166|r 8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGA-KVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEW 86 (284)
Q Consensus 8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (284)
T Consensus 10 l~~~~vlVIGaG---~~~~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~---~~~~~~~~~~---~~l~-------~~l 73 (134)
T pfam01488 10 LKGKKVLLIGAG---EMARLAAKHLLSKGAKKITIANRTLEKAKELAEEF---GGEEVEALPL---DELE-------ELL 73 (134)
T ss_pred CCCCEEEEECCC---HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHC---CCCCEEEEEC---HHHH-------HHH
T ss_conf 148989999960---99999999999759988999547578999999984---9972589851---3544-------136
Q ss_pred CCCCEEEECCCCC
Q ss_conf 7988999627212
Q gi|254781166|r 87 GTIDFLVHAIAFS 99 (284)
Q Consensus 87 G~iD~lInnag~~ 99 (284)
T Consensus 74 ~~~DivI~aT~s~ 86 (134)
T pfam01488 74 AEADIVISATSAP 86 (134)
T ss_pred HHCCEEEEECCCC
T ss_conf 3199999925999