RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254781166|ref|YP_003065579.1| enoyl-(acyl carrier protein) reductase [Candidatus Liberibacter asiaticus str. psy62] (284 letters) >gnl|CDD|30968 COG0623, FabI, Enoyl-[acyl-carrier-protein]. Length = 259 Score = 368 bits (947), Expect = e-103 Identities = 148/258 (57%), Positives = 200/258 (77%), Gaps = 1/258 (0%) Query: 7 LMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGH 66 L++ KR +++GVANNRS+AW IAK GA++A T+QG+ +KR+E L E + + Sbjct: 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLP 62 Query: 67 CNVSNSETIDDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYS 126 C+V+N E+ID +F ++K+WG +D LVH+IAF+ K EL G Y++T+RE FL MD+S YS Sbjct: 63 CDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYS 122 Query: 127 FTALAARASSLMNKGGSMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMDLGRQSGI 186 FTALA A LMN GGS+LTLTYLG+++V+P+YN MG AKAAL+++VRYLA DLG++ GI Sbjct: 123 FTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLGKE-GI 181 Query: 187 RVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFSSGVTG 246 RVNA+SAGP +TLA+SGI DFR +LK NE N+PL RN+T +EV +A +LLSD SSG+TG Sbjct: 182 RVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSGITG 241 Query: 247 ECHYVDAGYHIVGMKAED 264 E YVD+GYHI+GM +D Sbjct: 242 EIIYVDSGYHIMGMGPKD 259 >gnl|CDD|35944 KOG0725, KOG0725, KOG0725, Reductases with broad range of substrate specificities [General function prediction only]. Length = 270 Score = 91.3 bits (226), Expect = 3e-19 Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 20/268 (7%) Query: 6 NLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTW----QGDATKKRIEGLVEGMDF 61 + K +V G + + +IA + AGAKV +T + + T + + GL Sbjct: 4 GRLAGKVALVTGGS--SGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGK 61 Query: 62 FMAGHCNVSNSETIDDVFRN-LEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTM 120 +A C+VS ++ + +EK +G ID LV+ LTG ++ + E F M Sbjct: 62 VLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGA---LGLTGSILDLSEEVFDKIM 118 Query: 121 DVSV---YSFTALAARASSLMNKGGSMLTLTYLGADKVMPHYNC-MGPAKAALQSAVRYL 176 ++ AAR +KGGS++ ++ + P G +KAAL R L Sbjct: 119 ATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTRSL 178 Query: 177 AMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEY-----NSPLGRNITHDEVAK 231 A +L + GIRVN++S G KT + D + ++ E PLGR T +EVA+ Sbjct: 179 AKELAKH-GIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAE 237 Query: 232 SALYLLSDFSSGVTGECHYVDAGYHIVG 259 +A +L SD +S +TG+ VD G+ +VG Sbjct: 238 AAAFLASDDASYITGQTIIVDGGFTVVG 265 >gnl|CDD|31231 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]. Length = 251 Score = 88.7 bits (219), Expect = 2e-18 Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 14/255 (5%) Query: 8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALT----WQGDATKKRIEGLVEGMDFFM 63 + K +V G + + +IA+ GA+V + + A G Sbjct: 3 LSGKVALVTGAS--SGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAA 60 Query: 64 AGHCNVSNS-ETIDDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDV 122 A +VS+ E+++ + E+E+G ID LV+ A P T E++ +DV Sbjct: 61 AVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGI---AGPDAPLEELTEEDWDRVIDV 117 Query: 123 SVYSFTALAARASSLMNKGGSMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMDLGR 182 ++ L RA+ + K ++ ++ + P +KAAL + LA++L Sbjct: 118 NLLG-AFLLTRAALPLMKKQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAP 176 Query: 183 QSGIRVNALSAGPAKT-LASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSD-F 240 GIRVNA++ G T + ++ S LK PLGR T +EVA + +L SD Sbjct: 177 -RGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEA 235 Query: 241 SSGVTGECHYVDAGY 255 +S +TG+ VD G Sbjct: 236 ASYITGQTLPVDGGL 250 >gnl|CDD|36414 KOG1200, KOG1200, KOG1200, Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]. Length = 256 Score = 65.8 bits (160), Expect = 1e-11 Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 13/258 (5%) Query: 4 VDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFM 63 V + K V G + + +IA++ GA+VA+ A + G + G Sbjct: 8 VVQRLMSKVAAVTGGS--SGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHS 65 Query: 64 AGHCNVSNSETIDDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDV- 122 A C+VS + + + +EK GT LV+ + L + +E + + + V Sbjct: 66 AFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLL----LRMKQEQWDSVIAVN 121 Query: 123 --SVYSFTALAARASSLMN-KGGSMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMD 179 V+ T A RA + +G S++ ++ + +K + + A + Sbjct: 122 LTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTKTAARE 181 Query: 180 LGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSD 239 L R+ IRVN + G T + + +L P+GR +EVA L+L SD Sbjct: 182 LARK-NIRVNVVLPGFIATPMTEAMPP--KVLDKILGMIPMGRLGEAEEVANLVLFLASD 238 Query: 240 FSSGVTGECHYVDAGYHI 257 SS +TG V G + Sbjct: 239 ASSYITGTTLEVTGGLAM 256 >gnl|CDD|36421 KOG1207, KOG1207, KOG1207, Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]. Length = 245 Score = 56.2 bits (135), Expect = 1e-08 Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 8/170 (4%) Query: 91 FLVHAIAFSDKAELTGPYINTTRENFLNTMDV---SVYSFTALAARASSLMNKGGSMLTL 147 F + + + P+ T+++F T V +V L AR G+++ + Sbjct: 76 FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNV 135 Query: 148 TYLGADKVMPHYNCMGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDF 207 + + + + ++ KAAL + LA++LG Q IRVN+++ P + G ++ Sbjct: 136 SSQASIRPLDNHTVYCATKAALDMLTKCLALELGPQK-IRVNSVN--PTVVMTDMGRDNW 192 Query: 208 RYILKWNEY--NSPLGRNITHDEVAKSALYLLSDFSSGVTGECHYVDAGY 255 K + PL R DEV + L+LLSD SS TG V+ G+ Sbjct: 193 SDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEGGF 242 >gnl|CDD|33946 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]. Length = 246 Score = 52.5 bits (126), Expect = 1e-07 Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 21/220 (9%) Query: 27 SIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHC-----NVSNSETIDDVFRN 81 + A+ AGAKV L +R E L D AG +V++ ++ Sbjct: 21 ATARALAEAGAKVVLA------ARREERLEALADEIGAGAALALALDVTDRAAVEAAIEA 74 Query: 82 LEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLM--N 139 L +E+G ID LV+ + L P +++ +D +V M Sbjct: 75 LPEEFGRIDILVNNAGLA----LGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER 130 Query: 140 KGGSMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTL 199 K G ++ L + P G KAA+++ L +L +GIRV +S G +T Sbjct: 131 KSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELA-GTGIRVTVISPGLVETT 189 Query: 200 ASSGISDFRYILK-WNEYNSPLGRNITHDEVAKSALYLLS 238 S + + Y G +T +++A++ L+ + Sbjct: 190 EFSTVRFEGDDERADKVYKG--GTALTPEDIAEAVLFAAT 227 >gnl|CDD|36419 KOG1205, KOG1205, KOG1205, Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]. Length = 282 Score = 38.4 bits (89), Expect = 0.002 Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 19/185 (10%) Query: 22 RSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVE------GMDFFMAGHCNVSNSETI 75 +LA+ +AK GAK+ L +R+E + E ++ + +VS+ E++ Sbjct: 26 EALAYELAK----RGAKLVLV---ARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESV 78 Query: 76 DDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARAS 135 + +G +D LV+ S L G +T E+ N MD +V+ L A Sbjct: 79 KKFVEWAIRHFGRVDVLVNNAGIS----LVGFLEDTDIEDVRNVMDTNVFGTVYLTKAAL 134 Query: 136 SLM--NKGGSMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMDLGRQSGIRVNALSA 193 M G ++ ++ + +P + +K AL+ L +L I + +S Sbjct: 135 PSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSP 194 Query: 194 GPAKT 198 GP +T Sbjct: 195 GPIET 199 >gnl|CDD|39371 KOG4169, KOG4169, KOG4169, 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism, General function prediction only]. Length = 261 Score = 38.3 bits (89), Expect = 0.002 Identities = 39/189 (20%), Positives = 69/189 (36%), Gaps = 14/189 (7%) Query: 15 VLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMD----FFMAGHCNVS 70 L + + +K G KV + + + I L F+ C+V+ Sbjct: 8 ALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFI--KCDVT 65 Query: 71 NSETIDDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTAL 130 N ++ F + +GTID L++ D + T L + AL Sbjct: 66 NRGDLEAAFDKILATFGTIDILINGAGILDDKD-----WERTINVNLTGVINGTQ--LAL 118 Query: 131 AARASSLMNKGGSMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMDLG-RQSGIRVN 189 KGG ++ ++ + MP + +KA + R LA ++SG+R N Sbjct: 119 PYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFN 178 Query: 190 ALSAGPAKT 198 A+ G +T Sbjct: 179 AVCPGFTRT 187 >gnl|CDD|37795 KOG2584, KOG2584, KOG2584, Dihydroorotase and related enzymes [Nucleotide transport and metabolism]. Length = 522 Score = 33.8 bits (77), Expect = 0.063 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%) Query: 2 LVVDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGL-----V 56 +++D ++ DK G L A + W+ K+C G V +TW + K+ +E L V Sbjct: 102 MIIDFVLPDK-GTSLVEAFEKWREWADPKVCCDYGLHVGITWWSPSVKEEMEILVKEKGV 160 Query: 57 EGMDFFMA--GHCNVSNSETIDDVFRNLEKEWGTIDFLVHA 95 FFMA V +SE + + + E G + +VHA Sbjct: 161 NSFKFFMAYKDLYMVRDSE-LYEALKVC-AELGAL-AMVHA 198 >gnl|CDD|36423 KOG1209, KOG1209, KOG1209, 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]. Length = 289 Score = 32.7 bits (74), Expect = 0.13 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 8/138 (5%) Query: 68 NVSNSETIDDVFRNLEK-EWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVY- 125 +VS E + V + G +D L + + T P ++ T V+V+ Sbjct: 60 DVSKPEEVVTVSGEVRANPDGKLDLLYN----NAGQSCTFPALDATIAAVEQCFKVNVFG 115 Query: 126 SFTALAARASSLMNKGGSMLTLTYLGADKVMPHYNCMGPAKAALQSAVRYLAMDLGRQSG 185 A + L+ G+++ + L P + +KAA+ + R L ++L + G Sbjct: 116 HIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTLRLEL-KPFG 174 Query: 186 IRV-NALSAGPAKTLASS 202 +RV NA++ G A +A Sbjct: 175 VRVINAITGGVATDIADK 192 >gnl|CDD|36415 KOG1201, KOG1201, KOG1201, Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]. Length = 300 Score = 32.1 bits (73), Expect = 0.19 Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 30/190 (15%) Query: 22 RSLAWSIAKMCHAAGAKVALTWQ-----GDATKKRIEGLVEGMDFFMAGHCNVSNSETID 76 R +A AK GAK+ L W + T K I + E + C++S+ E I Sbjct: 52 RLIALEFAKR----GAKLVL-WDINKQGNEETVKEIRKIGEAKAYT----CDISDREEIY 102 Query: 77 DVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYS--FTALAARA 134 + + ++KE G +D LV+ +L ++ + E T DV+ + +T A Sbjct: 103 RLAKKVKKEVGDVDILVNNAGIVTGKKL----LDCSDEEIQKTFDVNTIAHFWTTKAFLP 158 Query: 135 SSLMNKGGSMLTLT----YLGADKVMPHYNCMGPAKAALQSAVRYLAMDLGRQS--GIRV 188 L N G ++T+ G + + +K A L+M+L GI+ Sbjct: 159 KMLENNNGHIVTIASVAGLFGPAGLADY----CASKFAAVGFHESLSMELRALGKDGIKT 214 Query: 189 NALSAGPAKT 198 + T Sbjct: 215 TLVCPYFINT 224 >gnl|CDD|39859 KOG4660, KOG4660, KOG4660, Protein Mei2, essential for commitment to meiosis, and related proteins [Cell cycle control, cell division, chromosome partitioning]. Length = 549 Score = 29.6 bits (66), Expect = 1.0 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 59 MDFFMAGHC--------NVSNSETIDDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYIN 110 + + G C N+ N T + EK GT DFL I F +K + +IN Sbjct: 378 LLRILDGECPRTTLMIKNIPNKYTSKMLLAADEKNKGTYDFLYLPIDFKNKCNVGYAFIN 437 Query: 111 TT 112 T Sbjct: 438 MT 439 >gnl|CDD|36652 KOG1439, KOG1439, KOG1439, RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones]. Length = 440 Score = 27.5 bits (61), Expect = 3.9 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 74 TIDDVFRNLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSF 127 T+ + GTIDF+ HAIA Y++ + L + + V SF Sbjct: 167 TMREFLGKFGLLEGTIDFIGHAIALL----CDDSYLDQPAKETLERILLYVRSF 216 >gnl|CDD|110027 pfam00996, GDI, GDP dissociation inhibitor. Length = 439 Score = 27.4 bits (61), Expect = 5.4 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Query: 74 TIDDVFRNLEKEWGTIDFLVHAIA-FSDKAELTGPYINT 111 T+ +V++ + TIDF+ HA+A + D L P + T Sbjct: 167 TMLEVYKKFGLDENTIDFIGHALALYRDDDYLNQPALPT 205 >gnl|CDD|143883 pfam00106, adh_short, short chain dehydrogenase. This family contains a wide variety of dehydrogenases. Length = 167 Score = 26.7 bits (60), Expect = 7.2 Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 14/106 (13%) Query: 28 IAKMCHAAGAK-VALT-WQGDA-----TKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFR 80 +A+ A GA+ + L +GDA +E L + C+V++ + + + Sbjct: 16 LARWLAAEGARHLVLVSRRGDAPGAAELVAELEALGAEVTVAA---CDVADRDALAALLA 72 Query: 81 NLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYS 126 L G +D +VH D L T E F + V Sbjct: 73 ALPAALGPLDGVVHNAGVLDDGPLE----ELTPERFERVLAPKVTG 114 >gnl|CDD|114305 pfam05575, V_cholerae_RfbT, Vibrio cholerae RfbT protein. This family consists of several RfbT proteins from Vibrio cholerae. It has been found that genetic alteration of the rfbT gene is responsible for serotype conversion of Vibrio cholerae O1 and determines the difference between the Ogawa and Inaba serotypes, in that the presence of rfbT is sufficient for Inaba-to-Ogawa serotype conversion. Length = 286 Score = 26.6 bits (58), Expect = 7.2 Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 62 FMAGHCNVSNSETIDDVFRNLEKEWGTIDFLVHAIAFSDKAEL 104 F GH SN T D++F + ++G+ + +H ++ ++ E Sbjct: 228 FAMGHIQRSN-RTFDEIFNIINSKFGSKAYFIHPLSSAEHPEF 269 >gnl|CDD|146239 pfam03486, HI0933_like, HI0933-like protein. Length = 405 Score = 26.8 bits (60), Expect = 7.5 Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 11/52 (21%) Query: 32 CHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGH--CNVSNSETIDDVFRN 81 G +V L + KK G ++G CNV+NS D+ Sbjct: 19 AAKRGRRVLLI---EKGKK------LGRKILISGGGRCNVTNSVEPDNFLSR 61 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.317 0.131 0.384 Gapped Lambda K H 0.267 0.0535 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 3,188,701 Number of extensions: 157469 Number of successful extensions: 285 Number of sequences better than 10.0: 1 Number of HSP's gapped: 276 Number of HSP's successfully gapped: 17 Length of query: 284 Length of database: 6,263,737 Length adjustment: 93 Effective length of query: 191 Effective length of database: 4,254,100 Effective search space: 812533100 Effective search space used: 812533100 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 57 (26.2 bits)