HHsearch alignment for GI: 254781167 and conserved domain: PRK00043

Probab=95.47  E-value=0.032  Score=36.20  Aligned_cols=85  Identities=15%  Similarity=0.214  Sum_probs=59.5

Q ss_pred             HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH-HCCCCEEEECC
Q ss_conf             43200012201210013566402577421227661046787666738875302577778998988874-20352344122
Q gi|254781167|r  140 VKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKIL-PSVDGVMIGRA  218 (322)
Q Consensus       140 ~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l-~~~dgvMigRg  218 (322)
T Consensus       116 ~~~A~~~gaDYi~~Gpv---f~T~--tK~~~~~~~g~~~l~~~~~~~-~iPvvAIGGI-~~~ni~~~~~~Ga~giAvis~  188 (210)
T PRK00043        116 AAAAAAAGADYVGVGPI---FPTP--TKKDAKPAVGLELLREAREAI-DIPIVAIGGI-TPENAAEVLEAGADGVAVVSA  188 (210)
T ss_pred             HHHHHHHCCCEEEECCC---CCCC--CCCCCCCCCCHHHHHHHHHHC-CCCEEEECCC-CHHHHHHHHHCCCCEEEEEHH
T ss_conf             99998828983887452---1479--888887778999999999847-9998998088-999999999809999997089


Q ss_pred             CCCHHHHHHHHHH
Q ss_conf             0001243999999
Q gi|254781167|r  219 AYKNSAMLTTVDE  231 (322)
Q Consensus       219 a~~~P~if~~I~~  231 (322)
T Consensus       189 I~~a~dp~~a~~~  201 (210)
T PRK00043        189 ITAAEDPAAAARA  201 (210)
T ss_pred             HHCCCCHHHHHHH
T ss_conf             7769999999999