HHsearch alignment for GI: 254781167 and conserved domain: PRK01033
>PRK01033 imidazole glycerol phosphate synthase subunit HisF; Provisional.
Probab=97.77 E-value=6.2e-05 Score=56.20 Aligned_cols=142 Identities=13% Similarity=0.265 Sum_probs=97.4
Q ss_pred CEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE----
Q ss_conf 4699982699899999887531045377744256413677666889999855899999999985027906999861----
Q gi|254781167|r 49 PLALQIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPVTVKCR---- 124 (322)
Q Consensus 49 p~~~Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pvsvK~R---- 124 (322)
T Consensus 74 ~ipi~vGGGI-rs~e~~~~ll-~~GadkViig--------------s~a~~~p~~i~~~~~~fG~-q~IvvsiD~k~~~~ 136 (253)
T PRK01033 74 FMPLCYGGGI-KTVEQAKRIF-SLGVEKVSIS--------------TAALEDPKLITEAAEIYGS-QSVVVSIDVKKRLF 136 (253)
T ss_pred CCCEEEECCC-CCHHHHHHHH-HCCCCEEEEC--------------CHHHHCCHHHHHHHHHCCC-CCEEEEEEEECCCC
T ss_conf 9988986881-2168889998-6798669999--------------8786374165789987799-76999999824877
Q ss_pred -------CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf -------1345665322014554320001220121001356640257742122766104678766673887530257777
Q gi|254781167|r 125 -------IGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGL 197 (322)
Q Consensus 125 -------lG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi 197 (322)
T Consensus 137 ~~~~v~~~g~~~-~t~~~~~~~~~~~~~~g~geil~TdI~--------rDGt~~G-~d~~l~~~i~~~~-~ipiIasGGi 205 (253)
T PRK01033 137 GRYDVYTHNGTK-KTGLDPVEFAKQAEELGAGEIVLNSID--------RDGVMKG-YDLELIKKISSAV-KIPVTALGGA 205 (253)
T ss_pred CCEEEEEECCCC-CCCCCHHHHHHHHHHCCCCEEEEEEEC--------CCCCCCC-CCHHHHHHHHHHC-CCCEEEECCC
T ss_conf 834789867953-678558999999874697799998784--------8897668-7999999999878-9999997898
Q ss_pred CCHHHHHHHH--HCCCCEEEECC
Q ss_conf 8998988874--20352344122
Q gi|254781167|r 198 EDMSQALKIL--PSVDGVMIGRA 218 (322)
Q Consensus 198 ~~~~~a~~~l--~~~dgvMigRg 218 (322)
T Consensus 206 ~s~~di~~l~~~~~v~gv~~gs~ 228 (253)
T PRK01033 206 GSLDDIADLIQEAGASAAAAGSL 228 (253)
T ss_pred CCHHHHHHHHHHCCCEEEEEEEE
T ss_conf 99999999998679739978316