HHsearch alignment for GI: 254781167 and conserved domain: PRK01033

>PRK01033 imidazole glycerol phosphate synthase subunit HisF; Provisional.
Probab=97.77  E-value=6.2e-05  Score=56.20  Aligned_cols=142  Identities=13%  Similarity=0.265  Sum_probs=97.4

Q ss_pred             CEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE----
Q ss_conf             4699982699899999887531045377744256413677666889999855899999999985027906999861----
Q gi|254781167|r   49 PLALQIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPVTVKCR----  124 (322)
Q Consensus        49 p~~~Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pvsvK~R----  124 (322)
T Consensus        74 ~ipi~vGGGI-rs~e~~~~ll-~~GadkViig--------------s~a~~~p~~i~~~~~~fG~-q~IvvsiD~k~~~~  136 (253)
T PRK01033         74 FMPLCYGGGI-KTVEQAKRIF-SLGVEKVSIS--------------TAALEDPKLITEAAEIYGS-QSVVVSIDVKKRLF  136 (253)
T ss_pred             CCCEEEECCC-CCHHHHHHHH-HCCCCEEEEC--------------CHHHHCCHHHHHHHHHCCC-CCEEEEEEEECCCC
T ss_conf             9988986881-2168889998-6798669999--------------8786374165789987799-76999999824877


Q ss_pred             -------CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             -------1345665322014554320001220121001356640257742122766104678766673887530257777
Q gi|254781167|r  125 -------IGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGL  197 (322)
Q Consensus       125 -------lG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi  197 (322)
T Consensus       137 ~~~~v~~~g~~~-~t~~~~~~~~~~~~~~g~geil~TdI~--------rDGt~~G-~d~~l~~~i~~~~-~ipiIasGGi  205 (253)
T PRK01033        137 GRYDVYTHNGTK-KTGLDPVEFAKQAEELGAGEIVLNSID--------RDGVMKG-YDLELIKKISSAV-KIPVTALGGA  205 (253)
T ss_pred             CCEEEEEECCCC-CCCCCHHHHHHHHHHCCCCEEEEEEEC--------CCCCCCC-CCHHHHHHHHHHC-CCCEEEECCC
T ss_conf             834789867953-678558999999874697799998784--------8897668-7999999999878-9999997898


Q ss_pred             CCHHHHHHHH--HCCCCEEEECC
Q ss_conf             8998988874--20352344122
Q gi|254781167|r  198 EDMSQALKIL--PSVDGVMIGRA  218 (322)
Q Consensus       198 ~~~~~a~~~l--~~~dgvMigRg  218 (322)
T Consensus       206 ~s~~di~~l~~~~~v~gv~~gs~  228 (253)
T PRK01033        206 GSLDDIADLIQEAGASAAAAGSL  228 (253)
T ss_pred             CCHHHHHHHHHHCCCEEEEEEEE
T ss_conf             99999999998679739978316