HHsearch alignment for GI: 254781167 and conserved domain: PRK05211

Probab=98.01  E-value=5.5e-05  Score=56.56  Aligned_cols=171  Identities=16%  Similarity=0.280  Sum_probs=111.2

Q ss_pred             HHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             98302745784699982699899999887531045377744256413677666889999855899999999985027906
Q gi|254781167|r   39 NILGFSTQEKPLALQIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIP  118 (322)
Q Consensus        39 ~~~~~~~~e~p~~~Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~p  118 (322)
T Consensus        55 ~~I~~i~~~~~~Pl~vGGG-Irs~~~i~~ll-~~GadkViig--------------s~a~~np~li~~~~~~fG~-q~Iv  117 (248)
T PRK05211         55 SWVSRVAEVIDIPFCVAGG-IKSVEDAREIL-SFGADKISIN--------------SPALADPTLITRLADRFGV-QCIV  117 (248)
T ss_pred             HHHHHHHHHCCCCEEEECC-CCCHHHHHHHH-HCCCCEEEEC--------------CHHHHCCHHHHHHHHHCCC-CEEE
T ss_conf             9999999767985896278-01389999999-8799889989--------------7676196189999985799-3699


Q ss_pred             EEEEEE-------------CCCCC--CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             999861-------------13456--653220145543200012201210013566402577421227661046787666
Q gi|254781167|r  119 VTVKCR-------------IGVDD--QIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIK  183 (322)
Q Consensus       119 vsvK~R-------------lG~~~--~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~  183 (322)
T Consensus       118 vsiD~~~~~~~~~~~v~~~~g~~~~~~~t~~~~~d~i~~~~~~G~geIl~---t~Id-----rDG~~~G-~dl~l~~~i~  188 (248)
T PRK05211        118 VGIDSWFDAETGKYQVYQYTGDESRTKATQWETLDWVKEVQKRGAGEIVL---NMMN-----QDGVRNG-YDLAQLKKVR  188 (248)
T ss_pred             EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE---EEEC-----CCCCCCC-CCHHHHHHHH
T ss_conf             99971025557857999825865653047736999999999759866999---8987-----8997278-8999999999


Q ss_pred             HHCCCCCCCCCCCCCCHHHHHHHH--HCCCCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf             738875302577778998988874--20352344122000124399999987199
Q gi|254781167|r  184 KENPDLFIGLNGGLEDMSQALKIL--PSVDGVMIGRAAYKNSAMLTTVDEYFSNP  236 (322)
Q Consensus       184 ~~~~~~~i~~NGdi~~~~~a~~~l--~~~dgvMigRga~~~P~if~~I~~~l~~~  236 (322)
T Consensus       189 ~~~-~iPvIasGGv~s~~di~~~~~~~~~~gvi~gs~~~~~~i~l~e~k~~L~~~  242 (248)
T PRK05211        189 AIC-HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKQYLAAQ  242 (248)
T ss_pred             HHC-CCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHC
T ss_conf             746-999999888899999999998679841330488888999999999999987