HHsearch alignment for GI: 254781167 and conserved domain: PRK05567

Probab=95.51  E-value=0.016  Score=38.32  Aligned_cols=71  Identities=25%  Similarity=0.346  Sum_probs=53.2

Q ss_pred             CHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH-CCCCE
Q ss_conf             01455432000122012100135664025774212276610467876667388753025777789989888742-03523
Q gi|254781167|r  135 ALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKILP-SVDGV  213 (322)
Q Consensus       135 ~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~-~~dgv  213 (322)
T Consensus       228 ~~~eRa~~Lv~AGvDvivIDtA----hGhs----~~----vi~~ik~ik~~~~~v~vi-aGNv~T~~~a~~L~~aGaD~v  294 (486)
T PRK05567        228 DNEERAEALVKAGVDVLVVDTA----HGHS----EG----VLDRVREIKAKYPDVQII-AGNVATAEAARALIEAGADAV  294 (486)
T ss_pred             CHHHHHHHHHHCCCCEEEEECC----CCCH----HH----HHHHHHHHHHCCCCCCEE-EEEECHHHHHHHHHHCCCCEE
T ss_conf             1899999999769988995044----5215----77----899999997407877368-751201999999997298769


Q ss_pred             EEECC
Q ss_conf             44122
Q gi|254781167|r  214 MIGRA  218 (322)
Q Consensus       214 MigRg  218 (322)
T Consensus       295 kVGiG  299 (486)
T PRK05567        295 KVGIG  299 (486)
T ss_pred             EECCC
T ss_conf             96566