HHsearch alignment for GI: 254781167 and conserved domain: PRK13523
>PRK13523 NADPH dehydrogenase NamA; Provisional.
Probab=99.28 E-value=1.2e-10 Score=98.40 Aligned_cols=228 Identities=19% Similarity=0.263 Sum_probs=154.2
Q ss_pred CCCHHHHHHH-HHHCCCEEEECCCCCCH--HHHC-------CCH-----HHHH-HCCCCCCCEEEEEECC----------
Q ss_conf 8607899999-98289829981703324--7760-------897-----8983-0274578469998269----------
Q gi|254781167|r 4 WTDRHYRFFA-RLLTNNALLYTEMIVAD--AILR-------GDK-----KNIL-GFSTQEKPLALQIGGA---------- 57 (322)
Q Consensus 4 ~Td~~fR~l~-r~~~~~~~~~TEmi~a~--~l~~-------~~~-----~~~~-~~~~~e~p~~~Ql~g~---------- 57 (322)
T Consensus 35 ~t~~~~~yy~~rA~GG~GlIi~e~~~V~~~g~~~~~~~~i~~d~~i~~~~~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~ 114 (337)
T PRK13523 35 VTNFHLIHYGTRAAGQVGLIIVEATAVTPEGRISDKDLGIWDDEHIEGLHKLVTFIHDHGAKAAIQLAHAGRKAELEGDI 114 (337)
T ss_pred CCHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
T ss_conf 99999999999976897299983588662214799875566277899999999999755886887500177556789981
Q ss_pred -------------C------------HHHHHHHHHHHHCCCCCEEEECCCC---------CHHHHHHHHHHHHHHHHHHH
Q ss_conf -------------9------------8999998875310453777442564---------13677666889999855899
Q gi|254781167|r 58 -------------D------------ISKLVEAAKIVEDFGYNEINLNVGC---------PSARVHEGSFGACLMLNPDI 103 (322)
Q Consensus 58 -------------~------------p~~~~~aa~~~~~~g~~~idlN~GC---------P~~~v~~~g~GaaLl~~p~~ 103 (322)
T Consensus 115 ~aPS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~YGGs~eNR~Rf 194 (337)
T PRK13523 115 VAPSAIPFDEKSKTPVEMTKEQIKETVLAFKQAAKRAKEAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRF 194 (337)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCHHHCCCCCCCCCCHHHHHHH
T ss_conf 07778867889998864999999999999999999999849998998135435899847923248958558888999889
Q ss_pred HHHHHHHHHCCCCEEEEEEEECCCCCC----CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCC-CCCHHHH
Q ss_conf 999999985027906999861134566----53220145543200012201210013566402577421227-6610467
Q gi|254781167|r 104 VGDCIAAMCKALSIPVTVKCRIGVDDQ----IPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKI-PNLDYDI 178 (322)
Q Consensus 104 ~~~iv~~~~~~~~~pvsvK~RlG~~~~----~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~-~~~~~~~ 178 (322)
T Consensus 195 ~lEii~aVr~~~~~~v~v--Ris~~d~~~gG~~~~d~~~~~~~l~~~GvD~i~vs~G~-----~~~~~-~~~~~g~~~~~ 266 (337)
T PRK13523 195 LREIIDAVKEVWDGPLFV--RISASDYHPDGLTVQDYVQYAKWMKEQGVDLIDVSSGA-----VVPAR-IDVYPGYQVPF 266 (337)
T ss_pred HHHHHHHHHHHCCCCEEE--EECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC-----CCCCC-CCCCCCCCHHH
T ss_conf 999999999865886399--93365557899898999999999997499989957885-----54776-77787533489
Q ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHH-C-CCCEEEECCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 876667388753025777789989888742-0-3523441220001243999999871998888
Q gi|254781167|r 179 VYEIKKENPDLFIGLNGGLEDMSQALKILP-S-VDGVMIGRAAYKNSAMLTTVDEYFSNPLTGS 240 (322)
Q Consensus 179 i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~-~-~dgvMigRga~~~P~if~~I~~~l~~~~~~~ 240 (322)
T Consensus 267 a~~ik~~~-~ipvi~vG~i~~~~~ae~~l~~G~aD~V~~gR~~iadPd~p~kaa~~~~~ei~~~ 329 (337)
T PRK13523 267 AEHIKEHA-NIATGAVGLITTGAQAEEILNNNRADLIFIGRELLRNPYFPRIAANELGFEIEEP 329 (337)
T ss_pred HHHHHHHC-CCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
T ss_conf 99999876-9709998386999999999987994799989999989109999997669999998