HHsearch alignment for GI: 254781167 and conserved domain: TIGR00735

>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit; InterPro: IPR004651 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes. Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in one family. These enzymes are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. HisA is a phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (), involved in the fourth step of histidine biosynthesis. The bacterial HisF protein is a cyclase which catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate during the sixth step of histidine biosynthesis. The yeast His7 protein is a bifunctional protein which catalyzes an amido-transferase reaction that generates imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide. The latter is the ribonucleotide used for purine biosynthesis. The enzyme also catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate, and is involved in the fifth and sixth steps in histidine biosynthesis. This family describes the histidine biosynthesis protein, HisF. ; GO: 0000107 imidazoleglycerol-phosphate synthase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm, 0009382 imidazoleglycerol-phosphate synthase complex.
Probab=90.54  E-value=0.42  Score=27.95  Aligned_cols=90  Identities=20%  Similarity=0.281  Sum_probs=71.9

Q ss_pred             CCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC---CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH-----
Q ss_conf             22014554320001220121001356640257742---1227661046787666738875302577778998988-----
Q gi|254781167|r  133 AVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKD---NRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQAL-----  204 (322)
Q Consensus       133 ~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~---~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~-----  204 (322)
T Consensus        41 aGDPVeLA~~Y~~eGADELVFLDITAS------~ecPl~R~---~m~~Vv~r~Ae~V-fiPlTVGGGI~~~eD~~GtkiP  110 (312)
T TIGR00735        41 AGDPVELAQRYDEEGADELVFLDITAS------SECPLGRE---TMIDVVERTAEKV-FIPLTVGGGIKSIEDVKGTKIP  110 (312)
T ss_pred             CCCHHHHHHHHHHCCCCEEEECCCCCC------CCCCCCCC---CHHHHHHHHHHHC-CCCEEECCCCCCHHHCCCCCCC
T ss_conf             178237899987628958985141136------66788880---1167888875214-5222216888843204564442


Q ss_pred             ------HHHH-CCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf             ------8742-035234412200012439999998
Q gi|254781167|r  205 ------KILP-SVDGVMIGRAAYKNSAMLTTVDEY  232 (322)
Q Consensus       205 ------~~l~-~~dgvMigRga~~~P~if~~I~~~  232 (322)
T Consensus       111 alevas~~L~aGADKvSiNTaAv~~P~li~e~a~~  145 (312)
T TIGR00735       111 ALEVASKLLRAGADKVSINTAAVKNPELISEAADR  145 (312)
T ss_pred             HHHHHHHHHHCCCCEEEECCHHHHCCHHHHHHHHC
T ss_conf             78999999854898463284675084478998732