HHsearch alignment for GI: 254781167 and conserved domain: cd00331
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water. IGPS is active as a separate monomer in most organisms, but is also found fused to other enzymes as part of a bifunctional or multifunctional enzyme involved in tryptophan biosynthesis.
Probab=94.71 E-value=0.056 Score=34.41 Aligned_cols=147 Identities=17% Similarity=0.217 Sum_probs=89.4
Q ss_pred EEECCCHHHHHHHHHHHH-C-CCCCE-EEECCCCCHHHHHHHHHH--HHHH----HHHHHHHHHHHHHHCCCCEEEEEEE
Q ss_conf 982699899999887531-0-45377-744256413677666889--9998----5589999999998502790699986
Q gi|254781167|r 53 QIGGADISKLVEAAKIVE-D-FGYNE-INLNVGCPSARVHEGSFG--ACLM----LNPDIVGDCIAAMCKALSIPVTVKC 123 (322)
Q Consensus 53 Ql~g~~p~~~~~aa~~~~-~-~g~~~-idlN~GCP~~~v~~~g~G--aaLl----~~p~~~~~iv~~~~~~~~~pvsvK~ 123 (322)
T Consensus 55 ~~F~Gs~~~L~~v~~~~~~PiLrKDFIid-----~~QI~ea~~~GAdaiLLI~~~L~~~~l~~l~~~a~~-lgl~~LvEv 128 (217)
T cd00331 55 KYFQGSLEDLRAVREAVSLPVLRKDFIID-----PYQIYEARAAGADAVLLIVAALDDEQLKELYELARE-LGMEVLVEV 128 (217)
T ss_pred CCCCCCHHHHHHHHHHCCCCEEECCCCCC-----HHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHH-HCCEEEEEE
T ss_conf 77798899999999847998674232176-----999999998199878798885499999999999999-498279885
Q ss_pred ECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCCCCCCHHH
Q ss_conf 1134566532201455432000122012100135664025774212276610467876667388-753025777789989
Q gi|254781167|r 124 RIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENP-DLFIGLNGGLEDMSQ 202 (322)
Q Consensus 124 RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~-~~~i~~NGdi~~~~~ 202 (322)
T Consensus 129 h-------~~~---El-~~a~~~~a~iIGINnRd-----------L~t~~vd~~~~~~L~~~ip~~~~~IsESGI~~~~d 186 (217)
T cd00331 129 H-------DEE---EL-ERALALGAKIIGINNRD-----------LKTFEVDLNTTERLAPLIPKDVILVSESGISTPED 186 (217)
T ss_pred C-------CHH---HH-HHHHHCCCCEEEECCCC-----------CHHCEECHHHHHHHHHHCCCCCEEEECCCCCCHHH
T ss_conf 8-------999---99-99995799878421677-----------12303478999999964898988998279999999
Q ss_pred HHHHHH-CCCCEEEECCCCCHHHHHH
Q ss_conf 888742-0352344122000124399
Q gi|254781167|r 203 ALKILP-SVDGVMIGRAAYKNSAMLT 227 (322)
Q Consensus 203 a~~~l~-~~dgvMigRga~~~P~if~ 227 (322)
T Consensus 187 i~~l~~~G~d~~LIG~sLm~~~~p~~ 212 (217)
T cd00331 187 VKRLAEAGADAVLIGESLMRAPDPGA 212 (217)
T ss_pred HHHHHHCCCCEEEECHHHHCCCCHHH
T ss_conf 99999879999998978867999899