HHsearch alignment for GI: 254781167 and conserved domain: cd00377
>cd00377 ICL_PEPM Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage. Known members are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate hydrolase (PPH), carboxyPEP mutase (CPEP mutase), oxaloacetate hydrolase (OAH), isocitrate lyase (ICL), and 2-methylisocitrate lyase (MICL). Isocitrate lyase (ICL) catalyzes the conversion of isocitrate to succinate and glyoxylate, the first committed step in the glyoxylate pathway. This carbon-conserving pathway is present in most prokaryotes, lower eukaryotes and plants, but has not been observed in vertebrates. PEP mutase (PEPM) turns phosphoenolpyruvate (PEP) into phosphonopyruvate (P-pyr), an important intermediate in the formation of organophosphonates, which function as antibiotics or play a role in pathogenesis or signaling. P-pyr can be hydrolyzed by phosphonopyruvate hydrolase (PPH) to from pyruvate and phosphate. Oxaloacetate acetylhydrolase (OAH) catalyzes the hydrolytic cleavage of oxaloacetate to
Probab=91.50 E-value=1.1 Score=24.90 Aligned_cols=156 Identities=20% Similarity=0.298 Sum_probs=81.5
Q ss_pred HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHC
Q ss_conf 88753104537774425641367766688999985589999999998502790699986113456653220145543200
Q gi|254781167|r 65 AAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPVTVKCRIGVDDQIPAVALRNLVKSIK 144 (322)
Q Consensus 65 aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pvsvK~RlG~~~~~~~~~~~~~~~~~~ 144 (322)
T Consensus 21 SAr~~~~~Gf~ai~~ss~~-~a~--s~G~pD~~~~~~~e~~~~~~~I~~a~~lPv~aD~d~GyG~~---~~v~~tv~~~~ 94 (243)
T cd00377 21 SARLAERAGFKAIYTSGAG-VAA--SLGLPDGGLLTLDEVLAAVRRIARAVDLPVIADADTGYGNA---LNVARTVRELE 94 (243)
T ss_pred HHHHHHHCCCCEEEECHHH-HHH--HCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCH---HHHHHHHHHHH
T ss_conf 9999998599999824899-999--75999878798789999999999616998899876677867---99999999999
Q ss_pred CCCCCHHHHHHHHHH--HHCCCCCCCCCCCCCHHHHHHHHH---H---HCCCCCCCCCCCC-----CCHHHHHHH----H
Q ss_conf 012201210013566--402577421227661046787666---7---3887530257777-----899898887----4
Q gi|254781167|r 145 KSGVNGIWIHARKAI--LKGLSPKDNRKIPNLDYDIVYEIK---K---ENPDLFIGLNGGL-----EDMSQALKI----L 207 (322)
Q Consensus 145 ~~g~~~itiH~Rt~~--~~g~s~~~~~~~~~~~~~~i~~l~---~---~~~~~~i~~NGdi-----~~~~~a~~~----l 207 (322)
T Consensus 95 ~aG~agi~IED~~~~k~~~~~~~~~--l~~~~--e~~~ki~aa~~a~~~~~d~~I~ARTDa~~~~~~~~~eai~R~~aY~ 170 (243)
T cd00377 95 EAGAAGIHIEDQVGPKKCGHHGGKV--LVPIE--EFVAKIKAARDARDDLPDFVIIARTDALLAGEEGLDEAIERAKAYA 170 (243)
T ss_pred HCCCCEEEECCCCCCCCCCCCCCCC--CCCHH--HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 7499679865878876566657632--30699--9999999999988636881687542345405788999999999999
Q ss_pred H-CCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 2-035234412200012439999998
Q gi|254781167|r 208 P-SVDGVMIGRAAYKNSAMLTTVDEY 232 (322)
Q Consensus 208 ~-~~dgvMigRga~~~P~if~~I~~~ 232 (322)
T Consensus 171 ~AGAD~ifi~~~--~~~~ei~~~~~~ 194 (243)
T cd00377 171 EAGADGIFVEGL--KDPEEIRAFAEA 194 (243)
T ss_pred HCCCCEEEECCC--CCHHHHHHHHHH
T ss_conf 829989994589--999999999973