HHsearch alignment for GI: 254781167 and conserved domain: cd00381
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=97.35 E-value=0.014 Score=38.72 Aligned_cols=135 Identities=19% Similarity=0.254 Sum_probs=82.0
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEEECCCC
Q ss_conf 699982699899999887531045377744256413677666889999855899999999985027-9069998611345
Q gi|254781167|r 50 LALQIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKAL-SIPVTVKCRIGVD 128 (322)
Q Consensus 50 ~~~Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~-~~pvsvK~RlG~~ 128 (322)
T Consensus 84 ~v~aaig~~~~~~~r~~~l~~-ag~d~i~ID--------vAhG~-------~~~~~~~ik~ir~~~p~~~Iia----G-- 141 (325)
T cd00381 84 LVGAAVGTREDDKERAEALVE-AGVDVIVID--------SAHGH-------SVYVIEMIKFIKKKYPNVDVIA----G-- 141 (325)
T ss_pred EEEEEECCCHHHHHHHHHHHH-CCCCEEEEE--------CHHCC-------CHHHHHHHHHHHHHCCCCCEEE----C--
T ss_conf 999997668628999999997-699899987--------00034-------5889999999997689975686----4--
Q ss_pred CCCCCCCHHHHHHHHCCCCCCHHHH------HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCCCCH
Q ss_conf 6653220145543200012201210------0135664025774212276610467876667388--7530257777899
Q gi|254781167|r 129 DQIPAVALRNLVKSIKKSGVNGIWI------HARKAILKGLSPKDNRKIPNLDYDIVYEIKKENP--DLFIGLNGGLEDM 200 (322)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~g~~~iti------H~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~--~~~i~~NGdi~~~ 200 (322)
T Consensus 142 ----NV~T~e~a~~L~~~GaD~vkVGiG~GS~CtTr~~t--------GvG~Pq~sai~~~a~~~~~~~v~iiaDGGi~~~ 209 (325)
T cd00381 142 ----NVVTAEAARDLIDAGADGVKVGIGPGSICTTRIVT--------GVGVPQATAVADVAAAARDYGVPVIADGGIRTS 209 (325)
T ss_pred ----CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCH
T ss_conf ----56689999999866998999757577776660101--------788745889999999763449858944873310
Q ss_pred HHHHHHHH-CCCCEEEECC
Q ss_conf 89888742-0352344122
Q gi|254781167|r 201 SQALKILP-SVDGVMIGRA 218 (322)
Q Consensus 201 ~~a~~~l~-~~dgvMigRg 218 (322)
T Consensus 210 Gdi~KAla~GAd~VMlG~~ 228 (325)
T cd00381 210 GDIVKALAAGADAVMLGSL 228 (325)
T ss_pred HHHHHHHHCCCCEEEECCH
T ss_conf 7888887528878984621