HHsearch alignment for GI: 254781167 and conserved domain: cd00429

>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.
Probab=95.67  E-value=0.065  Score=33.91  Aligned_cols=131  Identities=24%  Similarity=0.241  Sum_probs=66.7

Q ss_pred             EEEEEECCCHHHHHHHHHHHHCCCCCE--EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
Q ss_conf             699982699899999887531045377--744256413677666889999855899999999985027906999861134
Q gi|254781167|r   50 LALQIGGADISKLVEAAKIVEDFGYNE--INLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPVTVKCRIGV  127 (322)
Q Consensus        50 ~~~Ql~g~~p~~~~~aa~~~~~~g~~~--idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pvsvK~RlG~  127 (322)
T Consensus         2 IspSil~ad~~~l~~~i~~~~~~g~d~lHiDimDG~Fvpn---~t~g----------~~~v~~i~~~t~~~~DvHLMv--   66 (211)
T cd00429           2 IAPSILSADFANLGEELKRLEEAGADWIHIDVMDGHFVPN---LTFG----------PPVVKALRKHTDLPLDVHLMV--   66 (211)
T ss_pred             EEHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC---CCCC----------HHHHHHHHHHCCCCEEEEEEE--
T ss_conf             1573531799999999999997699989995757972786---6759----------899999987579970589987--


Q ss_pred             CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             56653220145543200012201210013566402577421227661046787666738875302577778998988874
Q gi|254781167|r  128 DDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKIL  207 (322)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l  207 (322)
T Consensus        67 ---~~---P~~~i~~~~~~g~d~I~~H~E~~-------------~~-~~~~i~~ik~~g~~~Glal~p~-T~~~~l~~~l  125 (211)
T cd00429          67 ---EN---PERYIEAFAKAGADIITFHAEAT-------------DH-LHRTIQLIKELGMKAGVALNPG-TPVEVLEPYL  125 (211)
T ss_pred             ---CC---HHHHHHHHHHHCCCEEEECCCCC-------------CC-HHHHHHHHHHCCCCCEEEECCC-CCHHHHHHHH
T ss_conf             ---18---87769999970998899864322-------------08-9999999997398723575489-9989999999


Q ss_pred             HCCCCEEEE
Q ss_conf             203523441
Q gi|254781167|r  208 PSVDGVMIG  216 (322)
Q Consensus       208 ~~~dgvMig  216 (322)
T Consensus       126 ~~~D~vliM  134 (211)
T cd00429         126 DEVDLVLVM  134 (211)
T ss_pred             HHHCEEEEE
T ss_conf             751522798