HHsearch alignment for GI: 254781167 and conserved domain: cd00429
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.
Probab=95.67 E-value=0.065 Score=33.91 Aligned_cols=131 Identities=24% Similarity=0.241 Sum_probs=66.7
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCCCE--EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
Q ss_conf 699982699899999887531045377--744256413677666889999855899999999985027906999861134
Q gi|254781167|r 50 LALQIGGADISKLVEAAKIVEDFGYNE--INLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPVTVKCRIGV 127 (322)
Q Consensus 50 ~~~Ql~g~~p~~~~~aa~~~~~~g~~~--idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pvsvK~RlG~ 127 (322)
T Consensus 2 IspSil~ad~~~l~~~i~~~~~~g~d~lHiDimDG~Fvpn---~t~g----------~~~v~~i~~~t~~~~DvHLMv-- 66 (211)
T cd00429 2 IAPSILSADFANLGEELKRLEEAGADWIHIDVMDGHFVPN---LTFG----------PPVVKALRKHTDLPLDVHLMV-- 66 (211)
T ss_pred EEHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC---CCCC----------HHHHHHHHHHCCCCEEEEEEE--
T ss_conf 1573531799999999999997699989995757972786---6759----------899999987579970589987--
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 56653220145543200012201210013566402577421227661046787666738875302577778998988874
Q gi|254781167|r 128 DDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKIL 207 (322)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l 207 (322)
T Consensus 67 ---~~---P~~~i~~~~~~g~d~I~~H~E~~-------------~~-~~~~i~~ik~~g~~~Glal~p~-T~~~~l~~~l 125 (211)
T cd00429 67 ---EN---PERYIEAFAKAGADIITFHAEAT-------------DH-LHRTIQLIKELGMKAGVALNPG-TPVEVLEPYL 125 (211)
T ss_pred ---CC---HHHHHHHHHHHCCCEEEECCCCC-------------CC-HHHHHHHHHHCCCCCEEEECCC-CCHHHHHHHH
T ss_conf ---18---87769999970998899864322-------------08-9999999997398723575489-9989999999
Q ss_pred HCCCCEEEE
Q ss_conf 203523441
Q gi|254781167|r 208 PSVDGVMIG 216 (322)
Q Consensus 208 ~~~dgvMig 216 (322)
T Consensus 126 ~~~D~vliM 134 (211)
T cd00429 126 DEVDLVLVM 134 (211)
T ss_pred HHHCEEEEE
T ss_conf 751522798