HHsearch alignment for GI: 254781167 and conserved domain: cd02922

>cd02922 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding domain. FCB2 (AKA L-lactate:cytochrome c oxidoreductase) is a respiratory enzyme located in the intermembrane space of fungal mitochondria which catalyzes the oxidation of L-lactate to pyruvate. FCB2 also participates in a short electron-transport chain involving cytochrome c and cytochrome oxidase which ultimately directs the reducing equivalents gained from L-lactate oxidation to oxygen, yielding one molecule of ATP for every L-lactate molecule consumed. FCB2 is composed of 2 domains: a C-terminal flavin-binding domain, which includes the active site for lacate oxidation, and an N-terminal b2-cytochrome domain, required for efficient cytochrome c reduction. FCB2 is a homotetramer and contains two noncovalently bound cofactors, FMN and heme per subunit.
Probab=98.17  E-value=3e-05  Score=58.56  Aligned_cols=162  Identities=23%  Similarity=0.301  Sum_probs=109.5

Q ss_pred             HHCCCCCCCEEEEEEC-CCHHHHHHHHHHHHCCCCCEEEECCCCCHHHH----HHHHHH-------------------HH
Q ss_conf             3027457846999826-99899999887531045377744256413677----666889-------------------99
Q gi|254781167|r   41 LGFSTQEKPLALQIGG-ADISKLVEAAKIVEDFGYNEINLNVGCPSARV----HEGSFG-------------------AC   96 (322)
Q Consensus        41 ~~~~~~e~p~~~Ql~g-~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v----~~~g~G-------------------aa   96 (322)
T Consensus       111 a~a~~~~~~~wfQLY~~~dr~~~~~li~RA~~aG~~alvlTvD~p~~G~R~rd~r~~~~~~~~~~~~~~~~~~~~~~~~~  190 (344)
T cd02922         111 VDARPPDQPLFFQLYVNKDRTKTEELLKRAEKLGAKAIFLTVDAPVLGKRERDERLKAEEAVSDGPAGKKTKAKGGGAGR  190 (344)
T ss_pred             HHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             98656898669998247767999999999998699889995678887752266650777788766543333446631667


Q ss_pred             ---HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHH--HHHHHHHHCCCCCCCCCC
Q ss_conf             ---985589999999998502790699986113456653220145543200012201210--013566402577421227
Q gi|254781167|r   97 ---LMLNPDIVGDCIAAMCKALSIPVTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWI--HARKAILKGLSPKDNRKI  171 (322)
Q Consensus        97 ---Ll~~p~~~~~iv~~~~~~~~~pvsvK~RlG~~~~~~~~~~~~~~~~~~~~g~~~iti--H~Rt~~~~g~s~~~~~~~  171 (322)
T Consensus       191 ~~~~~~~~~~tw~di~~lr~~~~~plivK---GIl-------~~~DA~~A~~~G~dgIiVSNHGGR----------qLD~  250 (344)
T cd02922         191 AMSGFIDPTLTWDDIKWLRKHTKLPIVLK---GVQ-------TVEDAVLAAEYGVDGIVLSNHGGR----------QLDT  250 (344)
T ss_pred             HHHHCCCCCCCHHHHHHHHHHCCCCEEEC---CCC-------CHHHHHHHHHCCCCEEEEECCCCC----------CCCC
T ss_conf             77750488899999999998669970100---257-------799999999659988997188621----------2578


Q ss_pred             CCCHHHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHHHH-CCCCEEEECCCCCHHHHHH
Q ss_conf             6610467876667----388753025777789989888742-0352344122000124399
Q gi|254781167|r  172 PNLDYDIVYEIKK----ENPDLFIGLNGGLEDMSQALKILP-SVDGVMIGRAAYKNSAMLT  227 (322)
Q Consensus       172 ~~~~~~~i~~l~~----~~~~~~i~~NGdi~~~~~a~~~l~-~~dgvMigRga~~~P~if~  227 (322)
T Consensus       251 ~~~~i~~Lp~I~~~~~av~~~~~v~~DgGiR~G~DV~KAlALGA~aV~iGR-----p~l~g  306 (344)
T cd02922         251 APAPIEVLLEIRKHCPEVFDKIEVYVDGGVRRGTDVLKALCLGAKAVGLGR-----PFLYA  306 (344)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECH-----HHHHH
T ss_conf             831899989999988985887089971885757899999976999897678-----99999