HHsearch alignment for GI: 254781167 and conserved domain: cd03316

>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=95.91  E-value=0.11  Score=32.31  Aligned_cols=138  Identities=14%  Similarity=0.096  Sum_probs=91.9

Q ss_pred             EEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CEEEEEEEECCCCCC
Q ss_conf             982699899999887531045377744256413677666889999855899999999985027--906999861134566
Q gi|254781167|r   53 QIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKAL--SIPVTVKCRIGVDDQ  130 (322)
Q Consensus        53 Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~--~~pvsvK~RlG~~~~  130 (322)
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~Gf~~~K~k~g~~~~~~----------~~~~~di~~v~~ir~~~g~~~~l~vDaN~~~---  200 (357)
T cd03316         134 GGYDDSPEELAEEAKRAVAEGFTAVKLKVGGPDSGG----------EDLREDLARVRAVREAVGPDVDLMVDANGRW---  200 (357)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC----------CCHHHHHHHHHHHHHHHCCCCEEEECCCCCC---
T ss_conf             478999999999999999769978985368886441----------2699999999999998299956986576555---


Q ss_pred             CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH--
Q ss_conf             532201455432000122012100135664025774212276610467876667388753025777789989888742--
Q gi|254781167|r  131 IPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKILP--  208 (322)
Q Consensus       131 ~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~a~~~l~--  208 (322)
T Consensus       201 -~~~~A~~~~~~l~~~~l~~iE----------------qP~~~~d~~~~~~l~~~~-~~pI~~~Es~~~~~~~~~~i~~~  262 (357)
T cd03316         201 -DLAEAIRLARALEEYDLFWFE----------------EPVPPDDLEGLARLRQAT-SVPIAAGENLYTRWEFRDLLEAG  262 (357)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHC----------------CCCCCCCHHHHHHHHHCC-CCCEEECCCCCCHHHHHHHHHCC
T ss_conf             -799999999988654466505----------------898955799999998628-99688178878878888888707


Q ss_pred             CCCCEEEECCCCC
Q ss_conf             0352344122000
Q gi|254781167|r  209 SVDGVMIGRAAYK  221 (322)
Q Consensus       209 ~~dgvMigRga~~  221 (322)
T Consensus       263 a~di~~~d~~~~G  275 (357)
T cd03316         263 AVDIIQPDVTKVG  275 (357)
T ss_pred             CCCEEEECCCCCC
T ss_conf             7763762674469