HHsearch alignment for GI: 254781167 and conserved domain: cd03328
>cd03328 MR_like_3 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 3. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=93.37 E-value=0.73 Score=26.16 Aligned_cols=156 Identities=15% Similarity=0.126 Sum_probs=93.1
Q ss_pred HHHHCCCCCCCEEEE--EECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Q ss_conf 983027457846999--82699899999887531045377744256413677666889999855899999999985027-
Q gi|254781167|r 39 NILGFSTQEKPLALQ--IGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKAL- 115 (322)
Q Consensus 39 ~~~~~~~~e~p~~~Q--l~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~- 115 (322)
T Consensus 117 ~LLG~~rd~i~~y~s~~~~~~~~~~~~~~~~~~~~~G~~~~K~k~g~~----------------~~~d~~~v~avR~~~G 180 (352)
T cd03328 117 RLLGRAHDSVPVYGSGGFTSYDDDRLREQLSGWVAQGIPRVKMKIGRD----------------PRRDPDRVAAARRAIG 180 (352)
T ss_pred HHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCC----------------HHHHHHHHHHHHHHHC
T ss_conf 984799874478752686789989999999999975998660347999----------------7888999999999748
Q ss_pred -CEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCC
Q ss_conf -906999861134566532201455432000122012100135664025774212276610467876667388-753025
Q gi|254781167|r 116 -SIPVTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENP-DLFIGL 193 (322)
Q Consensus 116 -~~pvsvK~RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~-~~~i~~ 193 (322)
T Consensus 181 ~~~~l~vDan~~~~----~~~Ai~~~~~l~~~~l~w~Ee----------------P~~~~d~~~~~~lr~~~~~~~pia~ 240 (352)
T cd03328 181 PDAELFVDANGAYS----RKQALALARAFADEGVTWFEE----------------PVSSDDLAGLRLVRERGPAGMDIAA 240 (352)
T ss_pred CCCEEEECCCCCCC----HHHHHHHHHHHHHHCCCEEEC----------------CCCCCCHHHHHHHHHHCCCCCCEEC
T ss_conf 89539867876889----999999999842306373878----------------9996689999999983799976414
Q ss_pred CCCCCCHHHHHHHHH--CCCCEEEECCCCCHHHHHHHHH
Q ss_conf 777789989888742--0352344122000124399999
Q gi|254781167|r 194 NGGLEDMSQALKILP--SVDGVMIGRAAYKNSAMLTTVD 230 (322)
Q Consensus 194 NGdi~~~~~a~~~l~--~~dgvMigRga~~~P~if~~I~ 230 (322)
T Consensus 241 gE~~~~~~~~~~~i~~~a~Di~~~d~~~~GGit~~~kia 279 (352)
T cd03328 241 GEYAYTLAYFRRLLEAHAVDVLQADVTRCGGVTGFLQAA 279 (352)
T ss_pred CCCCCCHHHHHHHHHCCCCCEEEECCCEECCHHHHHHHH
T ss_conf 866589899999998178785840411008699999999