HHsearch alignment for GI: 254781167 and conserved domain: cd03332

>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.
Probab=94.60  E-value=0.12  Score=31.89  Aligned_cols=165  Identities=16%  Similarity=0.100  Sum_probs=86.3

Q ss_pred             EEECCCHHH-HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH-H-----HHHHHHHHHHHHHHHHHHCCC--CEEEEEEE
Q ss_conf             982699899-99988753104537774425641367766688-9-----999855899999999985027--90699986
Q gi|254781167|r   53 QIGGADISK-LVEAAKIVEDFGYNEINLNVGCPSARVHEGSF-G-----ACLMLNPDIVGDCIAAMCKAL--SIPVTVKC  123 (322)
Q Consensus        53 Ql~g~~p~~-~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~-G-----aaLl~~p~~~~~iv~~~~~~~--~~pvsvK~  123 (322)
T Consensus        97 ~l~hp~gE~~~AraA~~~g~--~~~lSt~ss~slEeva~~~~~~~~wfQLY~~~Dr~~~~~ll~RA~~aG~~aLvlTVD~  174 (383)
T cd03332          97 ELFHPDAELATARAAAELGV--PYILSTASSSSIEDVAAAAGDAPRWFQLYWPKDDDLTESLLRRAEKAGYRVLVVTLDT  174 (383)
T ss_pred             HCCCCCHHHHHHHHHHHHCC--CEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             41489778999999998358--6220577678899999866899639999515888999999999997389779992268


Q ss_pred             E-CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHC----C---CC----------CCCCCCCCCHHHHHHHHHHH
Q ss_conf             1-13456653220145543200012201210013566402----5---77----------42122766104678766673
Q gi|254781167|r  124 R-IGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKG----L---SP----------KDNRKIPNLDYDIVYEIKKE  185 (322)
Q Consensus       124 R-lG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g----~---s~----------~~~~~~~~~~~~~i~~l~~~  185 (322)
T Consensus       175 Pv~G~Rerd-~r~--g~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ltW~di~wlr~~  251 (383)
T cd03332         175 WSLGWRPRD-LDL--GYLPFLRGIGIANYFSDPVFRKKLAEPVGEDPEAPPPMEAAVARFVSVFSGPSLTWEDLAFLREW  251 (383)
T ss_pred             CCCCCCHHH-HHC--CCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf             666876545-532--68864330367775478899997325677654567750145999998537888998999999987


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHH-CCCCEEE----ECCCCCHHH
Q ss_conf             88753025777789989888742-0352344----122000124
Q gi|254781167|r  186 NPDLFIGLNGGLEDMSQALKILP-SVDGVMI----GRAAYKNSA  224 (322)
Q Consensus       186 ~~~~~i~~NGdi~~~~~a~~~l~-~~dgvMi----gRga~~~P~  224 (322)
T Consensus       252 w-~~pli-lKGI~~~eDA~~A~~~G~dgIiVSNHGGRQLD~apa  293 (383)
T cd03332         252 T-DLPIV-LKGILHPDDARRAVEAGVDGVVVSNHGGRQVDGSIA  293 (383)
T ss_pred             C-CCCEE-ECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
T ss_conf             6-99853-235689999999997599889980786344678832