HHsearch alignment for GI: 254781167 and conserved domain: cd03332
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.
Probab=94.60 E-value=0.12 Score=31.89 Aligned_cols=165 Identities=16% Similarity=0.100 Sum_probs=86.3
Q ss_pred EEECCCHHH-HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH-H-----HHHHHHHHHHHHHHHHHHCCC--CEEEEEEE
Q ss_conf 982699899-99988753104537774425641367766688-9-----999855899999999985027--90699986
Q gi|254781167|r 53 QIGGADISK-LVEAAKIVEDFGYNEINLNVGCPSARVHEGSF-G-----ACLMLNPDIVGDCIAAMCKAL--SIPVTVKC 123 (322)
Q Consensus 53 Ql~g~~p~~-~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~-G-----aaLl~~p~~~~~iv~~~~~~~--~~pvsvK~ 123 (322)
T Consensus 97 ~l~hp~gE~~~AraA~~~g~--~~~lSt~ss~slEeva~~~~~~~~wfQLY~~~Dr~~~~~ll~RA~~aG~~aLvlTVD~ 174 (383)
T cd03332 97 ELFHPDAELATARAAAELGV--PYILSTASSSSIEDVAAAAGDAPRWFQLYWPKDDDLTESLLRRAEKAGYRVLVVTLDT 174 (383)
T ss_pred HCCCCCHHHHHHHHHHHHCC--CEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 41489778999999998358--6220577678899999866899639999515888999999999997389779992268
Q ss_pred E-CCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHC----C---CC----------CCCCCCCCCHHHHHHHHHHH
Q ss_conf 1-13456653220145543200012201210013566402----5---77----------42122766104678766673
Q gi|254781167|r 124 R-IGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKG----L---SP----------KDNRKIPNLDYDIVYEIKKE 185 (322)
Q Consensus 124 R-lG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g----~---s~----------~~~~~~~~~~~~~i~~l~~~ 185 (322)
T Consensus 175 Pv~G~Rerd-~r~--g~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ltW~di~wlr~~ 251 (383)
T cd03332 175 WSLGWRPRD-LDL--GYLPFLRGIGIANYFSDPVFRKKLAEPVGEDPEAPPPMEAAVARFVSVFSGPSLTWEDLAFLREW 251 (383)
T ss_pred CCCCCCHHH-HHC--CCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 666876545-532--68864330367775478899997325677654567750145999998537888998999999987
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHH-CCCCEEE----ECCCCCHHH
Q ss_conf 88753025777789989888742-0352344----122000124
Q gi|254781167|r 186 NPDLFIGLNGGLEDMSQALKILP-SVDGVMI----GRAAYKNSA 224 (322)
Q Consensus 186 ~~~~~i~~NGdi~~~~~a~~~l~-~~dgvMi----gRga~~~P~ 224 (322)
T Consensus 252 w-~~pli-lKGI~~~eDA~~A~~~G~dgIiVSNHGGRQLD~apa 293 (383)
T cd03332 252 T-DLPIV-LKGILHPDDARRAVEAGVDGVVVSNHGGRQVDGSIA 293 (383)
T ss_pred C-CCCEE-ECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
T ss_conf 6-99853-235689999999997599889980786344678832