HHsearch alignment for GI: 254781167 and conserved domain: cd04732
>cd04732 HisA HisA. Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene.
Probab=97.83 E-value=7.3e-05 Score=55.64 Aligned_cols=147 Identities=20% Similarity=0.385 Sum_probs=96.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC---
Q ss_conf 46999826998999998875310453777442564136776668899998558999999999850279069998611---
Q gi|254781167|r 49 PLALQIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMCKALSIPVTVKCRI--- 125 (322)
Q Consensus 49 p~~~Ql~g~~p~~~~~aa~~~~~~g~~~idlN~GCP~~~v~~~g~GaaLl~~p~~~~~iv~~~~~~~~~pvsvK~Rl--- 125 (322)
T Consensus 73 ~~pi~vGGGI-rs~~~~~~-l~~~Ga~kvvi--------------~s~~~~~~~~~~~~~~~~G~-q~iv~slD~k~~~~ 135 (234)
T cd04732 73 GIPVQVGGGI-RSLEDIER-LLDLGVSRVII--------------GTAAVKNPELVKELLKEYGG-ERIVVGLDAKDGKV 135 (234)
T ss_pred CCCEEECCCC-CCHHHHHH-HHHCCCCEEEE--------------CCCHHHCHHHHHHHHHHCCC-CCEEEEEEEECCCH
T ss_conf 9568973771-75999999-98648871897--------------14011082789999998297-64699999751200
Q ss_pred ---CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf ---34566532201455432000122012100135664025774212276610467876667388753025777789989
Q gi|254781167|r 126 ---GVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIPNLDYDIVYEIKKENPDLFIGLNGGLEDMSQ 202 (322)
Q Consensus 126 ---G~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~~~~~~~~~~i~~l~~~~~~~~i~~NGdi~~~~~ 202 (322)
T Consensus 136 ~~~~~~~-~~~~~~~~~i~~~~~~g~geiilt~i~--------~dGt~~G-~d~~ll~~i~~~~-~~p~i~~GGv~s~~d 204 (234)
T cd04732 136 ATKGWLE-TSEVSLEELAKRFEELGVKAIIYTDIS--------RDGTLSG-PNFELYKELAAAT-GIPVIASGGVSSLDD 204 (234)
T ss_pred HCCCCCE-EECCCHHHHHHHHHHCCCCEEEEEEEC--------CCCCCCC-CCHHHHHHHHHHC-CCCEEEEECCCCHHH
T ss_conf 0168640-013516999999974586469987642--------5665356-8999999998657-998999818999999
Q ss_pred HHHHHH-CCCCEEEECCCCCHH
Q ss_conf 888742-035234412200012
Q gi|254781167|r 203 ALKILP-SVDGVMIGRAAYKNS 223 (322)
Q Consensus 203 a~~~l~-~~dgvMigRga~~~P 223 (322)
T Consensus 205 i~~l~~~g~~gvivgsAlh~g~ 226 (234)
T cd04732 205 IKALKELGVAGVIVGKALYEGK 226 (234)
T ss_pred HHHHHHCCCCEEEEEHHHHCCC
T ss_conf 9999977998999988987799