HHsearch alignment for GI: 254781167 and conserved domain: cd04733
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=95.37 E-value=0.071 Score=33.63 Aligned_cols=89 Identities=26% Similarity=0.421 Sum_probs=54.4
Q ss_pred CHHHHHHHHCCCCCCHHHHHHHH--HHHHCCCCC----CCCCCCCCH------HHHHHHHHHHC-CCCCCCC--------
Q ss_conf 01455432000122012100135--664025774----212276610------46787666738-8753025--------
Q gi|254781167|r 135 ALRNLVKSIKKSGVNGIWIHARK--AILKGLSPK----DNRKIPNLD------YDIVYEIKKEN-PDLFIGL-------- 193 (322)
Q Consensus 135 ~~~~~~~~~~~~g~~~itiH~Rt--~~~~g~s~~----~~~~~~~~~------~~~i~~l~~~~-~~~~i~~-------- 193 (322)
T Consensus 150 ~f~~AA~rA~~AGfDgVEiH~ahGYLl~qFlS~~~N~RtDeYGGS~ENR~Rf~lEii~avr~~vg~d~~v~~Ris~~d~~ 229 (338)
T cd04733 150 RFAHAARLAQEAGFDGVQIHAAHGYLLSQFLSPLTNKRTDEYGGSLENRARLLLEIYDAIRAAVGPGFPVGIKLNSADFQ 229 (338)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHC
T ss_conf 99999999998399989982365548998629876899685798988998899999999999719988699984535424
Q ss_pred CCCCCCHHHHHHH---HH--CCCCEEEECCCCCHHH
Q ss_conf 7777899898887---42--0352344122000124
Q gi|254781167|r 194 NGGLEDMSQALKI---LP--SVDGVMIGRAAYKNSA 224 (322)
Q Consensus 194 NGdi~~~~~a~~~---l~--~~dgvMigRga~~~P~ 224 (322)
T Consensus 230 ~~G-~~~~d~~~~~~~l~~~GvD~i~vs~G~~~~~~ 264 (338)
T cd04733 230 RGG-FTEEDALEVVEALEEAGVDLVELSGGTYESPA 264 (338)
T ss_pred CCC-CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 799-99899999999998769988994688545732