HHsearch alignment for GI: 254781167 and conserved domain: cd04733

>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=95.37  E-value=0.071  Score=33.63  Aligned_cols=89  Identities=26%  Similarity=0.421  Sum_probs=54.4

Q ss_pred             CHHHHHHHHCCCCCCHHHHHHHH--HHHHCCCCC----CCCCCCCCH------HHHHHHHHHHC-CCCCCCC--------
Q ss_conf             01455432000122012100135--664025774----212276610------46787666738-8753025--------
Q gi|254781167|r  135 ALRNLVKSIKKSGVNGIWIHARK--AILKGLSPK----DNRKIPNLD------YDIVYEIKKEN-PDLFIGL--------  193 (322)
Q Consensus       135 ~~~~~~~~~~~~g~~~itiH~Rt--~~~~g~s~~----~~~~~~~~~------~~~i~~l~~~~-~~~~i~~--------  193 (322)
T Consensus       150 ~f~~AA~rA~~AGfDgVEiH~ahGYLl~qFlS~~~N~RtDeYGGS~ENR~Rf~lEii~avr~~vg~d~~v~~Ris~~d~~  229 (338)
T cd04733         150 RFAHAARLAQEAGFDGVQIHAAHGYLLSQFLSPLTNKRTDEYGGSLENRARLLLEIYDAIRAAVGPGFPVGIKLNSADFQ  229 (338)
T ss_pred             HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHC
T ss_conf             99999999998399989982365548998629876899685798988998899999999999719988699984535424


Q ss_pred             CCCCCCHHHHHHH---HH--CCCCEEEECCCCCHHH
Q ss_conf             7777899898887---42--0352344122000124
Q gi|254781167|r  194 NGGLEDMSQALKI---LP--SVDGVMIGRAAYKNSA  224 (322)
Q Consensus       194 NGdi~~~~~a~~~---l~--~~dgvMigRga~~~P~  224 (322)
T Consensus       230 ~~G-~~~~d~~~~~~~l~~~GvD~i~vs~G~~~~~~  264 (338)
T cd04733         230 RGG-FTEEDALEVVEALEEAGVDLVELSGGTYESPA  264 (338)
T ss_pred             CCC-CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             799-99899999999998769988994688545732