HHsearch alignment for GI: 254781167 and conserved domain: cd04734
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.
Probab=94.59 E-value=0.14 Score=31.44 Aligned_cols=89 Identities=22% Similarity=0.412 Sum_probs=54.0
Q ss_pred HHHHHHHHCCCCCCHHHHHHHH--HHHHCCCCCC----CCCCCCCH------HHHHHHHHHHC-CCCCCCC--------C
Q ss_conf 1455432000122012100135--6640257742----12276610------46787666738-8753025--------7
Q gi|254781167|r 136 LRNLVKSIKKSGVNGIWIHARK--AILKGLSPKD----NRKIPNLD------YDIVYEIKKEN-PDLFIGL--------N 194 (322)
Q Consensus 136 ~~~~~~~~~~~g~~~itiH~Rt--~~~~g~s~~~----~~~~~~~~------~~~i~~l~~~~-~~~~i~~--------N 194 (322)
T Consensus 143 f~~AA~~A~~AGfDgVEIH~ahGYLl~qFlSp~~N~RtDeYGGs~eNR~Rf~~EIi~~Ir~~vg~~f~i~~Ris~~~~~~ 222 (343)
T cd04734 143 FADAARRCQAGGLDGVELQAAHGHLIDQFLSPLTNRRTDEYGGSLENRMRFLLEVLAAVRAAVGPDFIVGIRISGDEDTE 222 (343)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 99999999973998898445777469984698558996767988899989999999999998198776158867623568
Q ss_pred CCCCCHHHHHHH---HH--C-CCCEEEECCCCCHHHH
Q ss_conf 777899898887---42--0-3523441220001243
Q gi|254781167|r 195 GGLEDMSQALKI---LP--S-VDGVMIGRAAYKNSAM 225 (322)
Q Consensus 195 Gdi~~~~~a~~~---l~--~-~dgvMigRga~~~P~i 225 (322)
T Consensus 223 ~g-~~~~e~~~~~~~l~~~G~vD~l~vs~g~~~~~~~ 258 (343)
T cd04734 223 GG-LSPDEALEIAARLAAEGLIDYVNVSAGSYYTLLG 258 (343)
T ss_pred CC-CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
T ss_conf 98-9989999999999966997689965675433222