HHsearch alignment for GI: 254781167 and conserved domain: cd04747
>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=98.60 E-value=1.1e-07 Score=76.48 Aligned_cols=228 Identities=20% Similarity=0.258 Sum_probs=134.8
Q ss_pred CCHHHHHHH-HHHCCCEEEECCCCCCH---HHH-------CCCH-----HHHH-HCCCCCCCEEEEEE--CC--------
Q ss_conf 607899999-98289829981703324---776-------0897-----8983-02745784699982--69--------
Q gi|254781167|r 5 TDRHYRFFA-RLLTNNALLYTEMIVAD---AIL-------RGDK-----KNIL-GFSTQEKPLALQIG--GA-------- 57 (322)
Q Consensus 5 Td~~fR~l~-r~~~~~~~~~TEmi~a~---~l~-------~~~~-----~~~~-~~~~~e~p~~~Ql~--g~-------- 57 (322)
T Consensus 32 t~~~~~yy~~rA~GG~Gliite~~~V~~~~~~~~~~~~~~~~d~~i~~~r~la~avH~~G~~~~~QL~H~G~~~~~~~~~ 111 (361)
T cd04747 32 GQDVAAYYRRRAAGGVGLIITEGTAVDHPAASGDPNVPRFHGEDALAGWKKVVDEVHAAGGKIAPQLWHVGAMRKLGTPP 111 (361)
T ss_pred CHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
T ss_conf 99999999999768961079706710562135899877758999999999999999976997987000356666666788
Q ss_pred C------------------------------HHHHHHHHHHHHCCCCCEEEECCCC---------CHHHHHHHHHHHHHH
Q ss_conf 9------------------------------8999998875310453777442564---------136776668899998
Q gi|254781167|r 58 D------------------------------ISKLVEAAKIVEDFGYNEINLNVGC---------PSARVHEGSFGACLM 98 (322)
Q Consensus 58 ~------------------------------p~~~~~aa~~~~~~g~~~idlN~GC---------P~~~v~~~g~GaaLl 98 (322)
T Consensus 112 ~~~~~~~~ps~~~~~~~~~~~~mt~eeI~~ii~~f~~AA~rA~~AGfDGVEIH~ahGyLl~qFLSp~~N~RtDeYGGSlE 191 (361)
T cd04747 112 FPDVPPLSPSGLVGPGKPVGREMTEADIDDVIAAFARAAADARRLGFDGIELHGAHGYLIDQFFWAGTNRRADGYGGSLA 191 (361)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCHH
T ss_conf 88988668756667889888879999999999999999999998399989951044658998358743889887899879
Q ss_pred HHHHHHHHHHHHHHCCC--CEEEEEEEECCCCCC-------CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 55899999999985027--906999861134566-------532201455432000122012100135664025774212
Q gi|254781167|r 99 LNPDIVGDCIAAMCKAL--SIPVTVKCRIGVDDQ-------IPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNR 169 (322)
Q Consensus 99 ~~p~~~~~iv~~~~~~~--~~pvsvK~RlG~~~~-------~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~~~ 169 (322)
T Consensus 192 NR~Rf~~Eii~aVr~~vg~df~vg~Ris-~~~~~~~~~~~~~~~ee~~~~~~~l~~~GvD~i~~s~~~~----~~p~--- 263 (361)
T cd04747 192 ARSRFAAEVVKAIRAAVGPDFPIILRFS-QWKQQDYTARLADTPDELEALLAPLVDAGVDIFHCSTRRF----WEPE--- 263 (361)
T ss_pred HHCCHHHHHHHHHHHHHCCCCEEEEEEC-CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC----CCCC---
T ss_conf 8473699999999997299875999967-7657676655679999999999999977999898413445----6765---
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCC------------------CCCCHHHHHHHHH--CCCCEEEECCCCCHHHHHHHH
Q ss_conf 27661046787666738875302577------------------7789989888742--035234412200012439999
Q gi|254781167|r 170 KIPNLDYDIVYEIKKENPDLFIGLNG------------------GLEDMSQALKILP--SVDGVMIGRAAYKNSAMLTTV 229 (322)
Q Consensus 170 ~~~~~~~~~i~~l~~~~~~~~i~~NG------------------di~~~~~a~~~l~--~~dgvMigRga~~~P~if~~I 229 (322)
T Consensus 264 ~~~-~~~~~~~~~k~~~-~~p~~~~g~~~~~~~~~~~~~~~~~~~~~~~e~ae~~l~~G~~D~V~~gR~llaDP~~v~K~ 341 (361)
T cd04747 264 FEG-SELNLAGWTKKLT-GLPTITVGSVGLDGDFIGAFAGDEGASPASLDRLLERLERGEFDLVAVGRALLSDPAWVAKV 341 (361)
T ss_pred CCC-CCCCHHHHHHHHC-CCCEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 677-7444889988862-89758644410356777775124544777999999999869941389759999754499999
Q ss_pred HHHHCCCCCCCCCCHH
Q ss_conf 9987199888899988
Q gi|254781167|r 230 DEYFSNPLTGSSPIKT 245 (322)
Q Consensus 230 ~~~l~~~~~~~~p~~~ 245 (322)
T Consensus 342 ~---~Gr~~dIrP~~~ 354 (361)
T cd04747 342 R---EGRLDELIPFSR 354 (361)
T ss_pred H---CCCHHHCCCCCH
T ss_conf 8---599421268997