HHsearch alignment for GI: 254781167 and conserved domain: pfam01645

>pfam01645 Glu_synthase Conserved region in glutamate synthase. This family represents a region of the glutamate synthase protein. This region is expressed as a separate subunit in the glutamate synthase alpha subunit from archaebacteria, or part of a large multidomain enzyme in other organisms. The aligned region of these proteins contains a putative FMN binding site and Fe-S cluster.
Probab=97.31  E-value=0.00039  Score=50.26  Aligned_cols=158  Identities=21%  Similarity=0.255  Sum_probs=92.3

Q ss_pred             EEEEE----ECCCHHHHHHHHHHHHCCCCCEEEECCCC----------CHHHHHHHH-------HHHHH--------HHH
Q ss_conf             69998----26998999998875310453777442564----------136776668-------89999--------855
Q gi|254781167|r   50 LALQI----GGADISKLVEAAKIVEDFGYNEINLNVGC----------PSARVHEGS-------FGACL--------MLN  100 (322)
Q Consensus        50 ~~~Ql----~g~~p~~~~~aa~~~~~~g~~~idlN~GC----------P~~~v~~~g-------~GaaL--------l~~  100 (322)
T Consensus       115 ~I~Qi~sgrFGv~~~~l~~~---------~~iEIKi~QGAKPG~GG~Lpg~KVt~eIA~~R~~~~G~d~iSP~~h~di~s  185 (367)
T pfam01645       115 AIKQVASGRFGVTPEYLNNA---------DAIEIKIAQGAKPGEGGHLPGEKVSPEIARIRGSPPGVGLISPPPHHDIYS  185 (367)
T ss_pred             CEEECCCCCCCCCHHHHCCC---------CEEEEEEECCCCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             17851367677897683256---------547999825878897883773544899996808999987678633478899


Q ss_pred             HHHHHHHHHHHHCCC-CEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC-CCCCCCCHHHH
Q ss_conf             899999999985027-9069998611345665322014554320001220121001356640257742-12276610467
Q gi|254781167|r  101 PDIVGDCIAAMCKAL-SIPVTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKD-NRKIPNLDYDI  178 (322)
Q Consensus       101 p~~~~~iv~~~~~~~-~~pvsvK~RlG~~~~~~~~~~~~~~~~~~~~g~~~itiH~Rt~~~~g~s~~~-~~~~~~~~~~~  178 (322)
T Consensus       186 ~edL~~~I~~Lr~~~~~~PVgvKl~~~~----~~---~~ia~~~aka~~D~I~IdG~eGGT-GAaP~~~~d~~Gl-P~~~  256 (367)
T pfam01645       186 IEDLAQLIYDLKEINPKAPISVKLVSGH----GV---GTIAAGVAKAGADIILIDGHDGGT-GASPKTSIKHAGL-PWEL  256 (367)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEEECCC----CH---HHHHHHHHCCCCCEEEECCCCCCC-CCCCHHHHHHCCC-HHHH
T ss_conf             9999999999984178994599981477----68---999998753678889971789867-7554889974424-6999


Q ss_pred             -HHH----HHH-HC-CCCCCCCCCCCCCHHHHHHHH-HCCCCEEEECCCCCHHHH
Q ss_conf             -876----667-38-875302577778998988874-203523441220001243
Q gi|254781167|r  179 -VYE----IKK-EN-PDLFIGLNGGLEDMSQALKIL-PSVDGVMIGRAAYKNSAM  225 (322)
Q Consensus       179 -i~~----l~~-~~-~~~~i~~NGdi~~~~~a~~~l-~~~dgvMigRga~~~P~i  225 (322)
T Consensus       257 ~L~~~~~~L~~~glR~~V~liasGgl~t~~Dv~ka~aLGAD~v~~gt~~m~AlGC  311 (367)
T pfam01645       257 ALAEVHQTLVENGLRDRVSLIADGGLRTGADVAKAAALGADAVYIGTAALIALGC  311 (367)
T ss_pred             HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf             9999999998706757649997699788899999998565354234799998648