HHsearch alignment of GI: 254781170 and MMDB domain: 1np7_A_314-441
>1np7_A (A:314-441) DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP}
Probab=100.00 E-value=0 Score=330.99 Aligned_cols=127 Identities=48% Similarity=0.936 Sum_probs=122.9
Q ss_pred HHCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCC
Q ss_conf 10120001046789987227888688999999997167635899999999998410470022334776641331114745
Q gi|254781170|r 311 TEKIEWNKDSHLLQAWKQGYTGFPIIDAAMRQLNTIGWMHNRLRMITASFLVKDLLVDWRIGEEYFMSQLLDGDLASNNG 390 (483)
Q Consensus 311 ~~~~~w~~~~~~~~aW~~G~TG~PlVDA~MR~L~~tG~mhnr~Rm~vaSfl~~~L~idWr~g~~~f~~~llD~d~~~n~~ 390 (483)
++.++|++|.+.+++|++|+||+|+||||||||++||||||++|||||||+++.|++|||.|++||+++|||||+++|++
T Consensus 2 ~~~~~~~~~~~~~~~w~~G~Tg~p~idaamr~L~~~G~~H~~~R~~va~~~~~~l~~~w~~g~~~f~~~liD~d~~~~~~ 81 (128)
T 1np7_A 2 NKNFPWQEDQVRFELWRSGQTGYPLVDANMRELNLTGFMSNRGRQNVASFLCKNLGIDWRWGAEWFESCLIDYDVCSNWG 81 (128)
T ss_dssp TCCCCCBCCHHHHHHHHTTCSSCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCBCHHHHHHHHHHHCTTCCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCHH
T ss_conf 43466535545556523489999457999999998788268999999999985678790789999998714765532888
Q ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEHCCCHHHHCCCHH
Q ss_conf 610020127898470220464589887248997833008243279977
Q gi|254781170|r 391 GWQWAASTGNDSVPYFRIFNPTIQGKRFDPQGTFIRHWLPELNNVPTQ 438 (483)
Q Consensus 391 ~wq~~a~~G~d~~~~~Ri~np~~q~~~~Dp~g~~ir~wvPeL~~~p~~ 438 (483)
+|||++|+|++..+ +|+|||++|++++||+|+|||+|||||+++|.+
T Consensus 82 ~wq~~~G~~~~~~~-~r~~~~~~~~~~~dp~g~y~~~~~pel~~~P~e 128 (128)
T 1np7_A 82 NWNYTAGIGNDARD-FRYFNIPKQSQQYDPQGTYLRHWLPELKNLPGD 128 (128)
T ss_dssp HHHHHHTSSCCTTS-CCCCCHHHHHHHHSTTSHHHHHHCGGGTTCCSG
T ss_pred HHHHHHCCCCCCCC-CEECCHHHHHHHHCCCCCCHHHHCHHHHCCCHH
T ss_conf 77888547889998-611388899998698976578748764169977