HHsearch alignment of GI: 254781170 and MMDB domain: 1owl_A_197-307

>1owl_A (A:197-307) Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus pcc 6301}
Probab=99.92  E-value=1e-26  Score=189.28  Aligned_cols=103  Identities=33%  Similarity=0.590  Sum_probs=90.7

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCHHHCC
Q ss_conf             54688876433322111111101101202686545666544611114648799999999998643111-23477200102
Q gi|254781170|r  205 DPMFPIGEQNALHILRKFCKEKVYYYVEQRDIPAIQGTSQLSPYLSIGVLSPRQCWNRLKEEFVDLLI-KPKSGAFSWLN  283 (483)
Q Consensus       205 ~~~~~gGe~~A~~~L~~Fl~~~l~~Y~~~Rn~p~~~~tSrLSPyL~~G~IS~R~v~~~~~~~~~~~~~-~~~~~~~~fl~  283 (483)
                      ...|+|||++|+++|++||++++..|.+.||.|+.++||+|||||+||+||||+|++++.+...+... ...+++++|++
T Consensus         7 ~~~~~~Ge~~A~~~L~~Fl~~~l~~Y~~~r~~p~~~~tS~LSpyL~~G~iS~r~v~~~~~~~~~~~~~~~~~~~~~~fi~   86 (111)
T 1owl_A            7 GFPVEPGETAAIARLQEFCDRAIADYDPQRNFPAEAGTSGLSPALKFGAIGIRQAWQAASAAHALSRSDEARNSIRVWQQ   86 (111)
T ss_dssp             CCSSCSSHHHHHHHHHHHHHTGGGGHHHHTTCTTSCCSCCCHHHHHTTSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             78879629999999999877787631000368666775643854427745599999999998644211221035899999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             3202468887888633578886153
Q gi|254781170|r  284 ELIWREFYRHLMAFYPSVCMGKPFI  308 (483)
Q Consensus       284 eL~WRef~~~~~~~~P~~~~~~~~~  308 (483)
                      ||+|||||+++++++|++.. .+|+
T Consensus        87 eL~WRef~~~~~~~~p~~~~-~~~~  110 (111)
T 1owl_A           87 ELAWREFYQHALYHFPSLAD-GPYR  110 (111)
T ss_dssp             HHHHHHHHHHHHHHCGGGGG-SCCS
T ss_pred             HHHHHHHHHHHHHCCCHHHH-HHCC
T ss_conf             99989999878750840544-3202